| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3318 |
|---|
| Symbol | |
|---|
| ID | 8334671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3661612 |
|---|
| End bp | 3662505 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644956463 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003114066 |
|---|
| Protein GI | 256392502 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCGC TCAACACGCA CTTCGTGCCC GCGTTGGACG GAGTGGCCTA CGGGCTGCTG
CTGTTCGTCG CGGCCGCGGG CCTGACATTG CTGTTCGGGA TCGGCGGTGT GCTGAACATC
GCCCACGGGA CCCTGTTCGC GCTCGGCGGC TACCTGGCCG CCACGGTGTC CGACGGCTCG
TGGTCCTCCG CGTTCCTGGG CTTGATCGTG GCCACCGTCG GCGGCACGCT CGGCGGCGGG
GTACTCGCCG CCAGCACGCT GCCGCTGGCC GAACGCGGCC ATCTGCCGCA AGCGCTGCTG
ACCTTCGGCC TGGCCCTGGT CGGCGGCGAC ATCCTGAGCA CCGTCTACGG CGGGGACCAG
CACCCCGTGG TGATCCCGAC CTCCGTCAGC GGGACGGTGC ACATCTTCGG GCACGTCTAT
CCCACCTACC GGCTGCTGTT CATCCTGGTG GCCTCGGTGC TGGCGCTGGC CGGGACGTAC
GTCCTGGGCC GGACCCGCGC CGGCGCGCTG CTGCGGGCCG CGGCCGACGA CCGGGACATG
GTCGGGGCGA TGGGTTACGC GCCCTGGCGC GTGCACGCCG CGCTGTGCGG CGCCGCCGGG
GCGCTGGCCG GACTGGCCGG CGGGCTCGGC GCGCCGATCA TCGGTCCCGG ACCGGACACC
GCCGACAAGG TCCTGATGCT CTCGATGGTG GTGATCGTGC TCGGCAAGCC CGGCTCGGTC
GCCGGGGCGT TCGTGGCGGC GATCGCGGTC GGGGAGATCG AGACGCTGGG CGTGTCCATC
TCCTCGAACT GGGCGCCCTA CCTGCTGTTC GGCCTGATGG CCGTGGGCCT GGTGGCCCGG
ACCTTCCGCG GCTCGTCGGC CTCGGTGGGC GCGCCGGCGG GAGCGCACGC ATGA
|
|---|
| Protein sequence | MGALNTHFVP ALDGVAYGLL LFVAAAGLTL LFGIGGVLNI AHGTLFALGG YLAATVSDGS
WSSAFLGLIV ATVGGTLGGG VLAASTLPLA ERGHLPQALL TFGLALVGGD ILSTVYGGDQ
HPVVIPTSVS GTVHIFGHVY PTYRLLFILV ASVLALAGTY VLGRTRAGAL LRAAADDRDM
VGAMGYAPWR VHAALCGAAG ALAGLAGGLG APIIGPGPDT ADKVLMLSMV VIVLGKPGSV
AGAFVAAIAV GEIETLGVSI SSNWAPYLLF GLMAVGLVAR TFRGSSASVG APAGAHA
|
|---|
| |