| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3314 |
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| Symbol | |
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| ID | 8334667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3655968 |
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| End bp | 3658970 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644956459 |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_003114062 |
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| Protein GI | 256392498 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAATCA CCAAGAAGCT CGGCATACTG GTCGCTGTCC CCCTGTGTGC CGTCTCCGGT
TTCGGGGCGC TGGCCTTGGT CACCTCGACA TCGGGGGCGA TCAGTGCCGG GCATCTGTAC
ACCCTGATGA ACTCCGCCAC GGCGGCCGGC GACCTGGTCG CCGAGCTGCA GGCCGAGCGG
ACCCAGGTCG CCTCCTACCT GACCTCCGCG CCCGGCTCGG ACGCCACGGC GCTGAACAAC
CAGATCGCCA AGACGCAGGC GGCGACCGCG GCCTACGAGG ACAAGCTGAA GAACATGCCG
TGGCTGTCCT CGGACGGCAA GGCGCTGCTG TCCCGGATCG ACGGCGAGCT GCGCTCCATC
GACACGCTGC GCCACCTGAT CCTCGGGAAC TCGCCGAAAA CGCTCTCGTC GGCGGACTTC
CAGTACCACA TCGTCATCGC CGACCTGCTC TCCTACCACG ACCTGGTACA GAACTCCGGC
GCCTCGAACC AGGTGGCGAC CATGCTGCGC GCGACCTCCG CGCTCAGCGA GGCTCGGGAA
GCGCTGTCCG GGGAGGAAGC CGACGTCCTG CGGACGATGG GCGAGGGCCA GACCGCCTCG
GCCGCCCAGG ACCTGATCAG CAGCCGCTCC AGCTACGCCA GCGCGATGGA GTCCTTCGGC
GCGCTGGCGC CGGCGAGCTG GCAGGACGAG CCGAACCAGG TGCTCGGCGG CGCGGGGATG
TCCAACGCCG GGCAGCTGGA GGACGCCGTC GCCCAGACGC CGATGGGCGC CCAGGTCTCG
GTGCAGCCCC AGGAGTGGAC GCCGCCGCTG GACGCCCGGC TCCGCGCGCT GGACGGCGTG
CGCCACGACA TGGACCTGGC CACCCTGGAC CTGATCGCCA AGGACCGGAC CCACCAGCGC
GAGCTGGCCG GTATCGAGGC CGCGGCGATC GCCGGCACGG TGCTGCTGGC GCTGATGGTC
AGCCTTCGGC TGGGCCGGCC GATCATCAAG GGTCTGCGAG GCCTGCGCGA CGGCGCGCAC
GCCGTCGCCT TCGAGGACCT GCCGGCCGCG GTGCAGGCGC TGCGCAGCAC CGGGTCGCTG
ACCGGTCAGA CCCCTGAGGA GTTCGCCGAC GAGGCGGCCG GCGGTCTGCC GGTCAAGGGC
GACGACGAGA TAGCCGCCGT GGCGCGCGCG TTCAACGCGG TCCGCCGCGA GGCCATCCGG
ACCGCCGCCG AACAGGTGCT GCTGCGCGCC GGCGTCGGCG CCGCGTTCGT CGCCCTGGCC
CGCCGCGGCG AACGCCTGAC CGGCGCGCTG ACCCTGGAGC TGGACAAGGC CGAGCGCGAC
GAGCAGGACC CGGACCGCTT GGCCCGGCTG TTCGTCCTGG ACCACCTGGC CGCCCGCATG
ACCCGCAACA ACGAGAGCCT GCTGGTGCTC GGCGGCGAGG GCACGGTGCG GGTGCGCGAC
GAGGGCGTGC CGCTGATCGA CGTGATCCGC GGCGCCGCCG GGCGCGTCGA GCGCTACTCG
CGCGTGGACC TGGTGAACGT CGACATGAGC GTGGTCGTCG CCCCGCCGGT GGTGGACCAC
CTGGTGCACC TGTGTGCGGA GCTGCTGGAC AACGCCACCG CCTTCTCCTC CCCGGACAGC
CGGGTGCTGG TCGACATGCG CGTGCTGGCC GACCGGATCA TCGTGCAGAT CACCGACCGC
GGCATCGGCA TGACGCCGCG GCGCCGCTCG GAGCTGAACG CCCGGCTGAC CACGCCGACC
CACCTGGACG CCGCCTCGGT CAAGGCGATG GGCCTGACCG TGGCCGGCCA GCTGGCCTCC
TGGTACGGCA TAGCCGTGGA GCTGCGCCAG AACCCGCAAG GGGGGACCAT CGCCGAGCTG
GTCCTGCCGC CCACGCTGTA CTGGGTGCCG GGTGCGCACG AGGAGTCCTT CGCCTCGCTG
CCGGCCACCG CGGTCAACTC GCTGACCGCC GCGATGGGGC AGACCGGCGG GTACAACCCG
AGCGCCCCGG CGCCGATGCC GAGCGTGGGC GCGGCCTCCC AGCCGGGAGC GGTGAACGGC
GGCCGGCGGC GGCGCGGGGC GGTGGCGCCG GAGGTGGCCG CCGACCAGCA GTTCGGCGCC
CCGGCAGCCG GCTTCGATCC GAACCGCAGG CCCTCGCCCT TCCCTCATCA GCCGGCCTCG
GCCATGGACG CGGCCGCGCA CTACGGCGCG CCGCAGGCCG GCATCGCTGA GGGCGTCAAC
GGATTCCCGC CCGCGCCGAT CCGGGTCAGG CCGCTGAGCC GGCCGGCCGG TCCGGCGAAT
CCGTCGGCTC CGGCAGGTCC GGCCGGTGAG CCGGTCGGAG CGCCGGGAAC CGGTCCGGGA
GTGGCGGACG GTCCGCTCAG TCCGTGGCTG GCCGGAGCGC TGCGCGGCAG GGCGGCGGCC
GAGGCGGCGC AGGCAGCACA AGCACAGGCC GCGCAGGCCG CCCAAGCTCA AGCGGTTCAG
GCCGCGCAGG CGGCGGCCCA AGCGGCGCAT CCCTCGTACC AGACGCAGGC CCAGCCCGAG
TATCAGGTCC GCGCGGCGTT CGAACCCCCG GCACAGCCCT CGTTCCAGGG CCGTCCCTCG
TTCCAGACCC AGCAGTCCCA GCCCGCTTAC CCGGCTGCAC CCGCCCCCGC CGGGTCGCCG
CCGTTCCAGG GCCAATCCTC CTATCAGGCA CGGCCCACGG TTCCGGCCCA GCCGTCGTAC
CAGGCCCAGC CCGCTCTGCC GACCGCCGCC CCCGGGCCGG TCGCGGTTCC GCCGGCGGCG
GCGCCGGCGC AGGAGCGGAC CGAGTCCAAG ACGACGCACG GCCTGCCCAA GCGGGTGCCT
TTGGCCCGGC TCCCCGCCGA GGCCATGGAC GAGGAACCGG AGGCGGCCAG CCCGGCTGAG
CGCGACCCGT CGCGGGTCTC GGCCTCGATG GTGGCCTACG CCCGCGGGAT CGGCGGCCGC
GGCGCCCCCG GCAGTGCCCC CCAGACCCCC TACACGCCGC CTTCAAGCAC AGGGACCTTC
TAA
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| Protein sequence | MRITKKLGIL VAVPLCAVSG FGALALVTST SGAISAGHLY TLMNSATAAG DLVAELQAER
TQVASYLTSA PGSDATALNN QIAKTQAATA AYEDKLKNMP WLSSDGKALL SRIDGELRSI
DTLRHLILGN SPKTLSSADF QYHIVIADLL SYHDLVQNSG ASNQVATMLR ATSALSEARE
ALSGEEADVL RTMGEGQTAS AAQDLISSRS SYASAMESFG ALAPASWQDE PNQVLGGAGM
SNAGQLEDAV AQTPMGAQVS VQPQEWTPPL DARLRALDGV RHDMDLATLD LIAKDRTHQR
ELAGIEAAAI AGTVLLALMV SLRLGRPIIK GLRGLRDGAH AVAFEDLPAA VQALRSTGSL
TGQTPEEFAD EAAGGLPVKG DDEIAAVARA FNAVRREAIR TAAEQVLLRA GVGAAFVALA
RRGERLTGAL TLELDKAERD EQDPDRLARL FVLDHLAARM TRNNESLLVL GGEGTVRVRD
EGVPLIDVIR GAAGRVERYS RVDLVNVDMS VVVAPPVVDH LVHLCAELLD NATAFSSPDS
RVLVDMRVLA DRIIVQITDR GIGMTPRRRS ELNARLTTPT HLDAASVKAM GLTVAGQLAS
WYGIAVELRQ NPQGGTIAEL VLPPTLYWVP GAHEESFASL PATAVNSLTA AMGQTGGYNP
SAPAPMPSVG AASQPGAVNG GRRRRGAVAP EVAADQQFGA PAAGFDPNRR PSPFPHQPAS
AMDAAAHYGA PQAGIAEGVN GFPPAPIRVR PLSRPAGPAN PSAPAGPAGE PVGAPGTGPG
VADGPLSPWL AGALRGRAAA EAAQAAQAQA AQAAQAQAVQ AAQAAAQAAH PSYQTQAQPE
YQVRAAFEPP AQPSFQGRPS FQTQQSQPAY PAAPAPAGSP PFQGQSSYQA RPTVPAQPSY
QAQPALPTAA PGPVAVPPAA APAQERTESK TTHGLPKRVP LARLPAEAMD EEPEAASPAE
RDPSRVSASM VAYARGIGGR GAPGSAPQTP YTPPSSTGTF
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