Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3284 |
Symbol | |
ID | 8334637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3621684 |
End bp | 3622436 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644956429 |
Product | putative deacetylase |
Protein accession | YP_003114032 |
Protein GI | 256392468 |
COG category | [R] General function prediction only |
COG ID | [COG3233] Predicted deacetylase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGGC CGCACCTGCT CGTCTCCATC CACGACATCG CGTCCGCCAG CGCCGCGCCT TCCGAGCGCT GGCTCGCCGA TCTCGACGCG CGCGGTATCC CGGGCACCCT GCTGGTGATC CCGGGACCGT GGCGCGGCGT CCGGCTGAGT CAGAACCTTG ATCTGGTCGC CACGCTGCAC GACGCCGCGT CCCGGGGTCA CGAACTGGCG CTGCACGGCT GGGCGCACAA GGCCGGACCG GACGGCGCGC CCTGGCGCCG CGCCACCGCG CAGCTGATCG CGCGCGGCGC GGCGGAGTTC GCCGCCTTGA ACGTCGCCGA CGCCACCGCC CGGCTCTCCG CCGGCTTGGC GGAGCTGGCC GCGCTCGACA TCGAGCCGGT CGGCTTCCAC CCGCCGGGCT GGCTCGCCTC GCCCGGGTCG TACCAGGCGC TGCGCCGCGT CGGGATCCGG TATTCGAGCT CTCACTTGTT CGTCCACGAC CTGATCACCG AGCAGCGCTA CACGCTCCCG GCGCTCTCGC ACCGCCCCGG CGGGACCGGC GAGGTCTTCG CCGCCCGCAT GATGCGCAAG ACCGCGTCCG CGATGATCCG GCGCGGCCGC TCGTTCCGGG TCGCCATGCA CCCGGACGAC TTGCGGCACC CCGGACTGCG CGCGACCACC TTGGCCGTCA TCGACGCCGC GCTCGCCGCC GGGTATCAAC CCAGCACCTA CTCCGGGCTC GTGATGCGCC GCGCAGCGGT CCCCCTGTCG TGA
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Protein sequence | MPRPHLLVSI HDIASASAAP SERWLADLDA RGIPGTLLVI PGPWRGVRLS QNLDLVATLH DAASRGHELA LHGWAHKAGP DGAPWRRATA QLIARGAAEF AALNVADATA RLSAGLAELA ALDIEPVGFH PPGWLASPGS YQALRRVGIR YSSSHLFVHD LITEQRYTLP ALSHRPGGTG EVFAARMMRK TASAMIRRGR SFRVAMHPDD LRHPGLRATT LAVIDAALAA GYQPSTYSGL VMRRAAVPLS
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