Gene Caci_3284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3284 
Symbol 
ID8334637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3621684 
End bp3622436 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content74% 
IMG OID644956429 
Productputative deacetylase 
Protein accessionYP_003114032 
Protein GI256392468 
COG category[R] General function prediction only 
COG ID[COG3233] Predicted deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGGC CGCACCTGCT CGTCTCCATC CACGACATCG CGTCCGCCAG CGCCGCGCCT 
TCCGAGCGCT GGCTCGCCGA TCTCGACGCG CGCGGTATCC CGGGCACCCT GCTGGTGATC
CCGGGACCGT GGCGCGGCGT CCGGCTGAGT CAGAACCTTG ATCTGGTCGC CACGCTGCAC
GACGCCGCGT CCCGGGGTCA CGAACTGGCG CTGCACGGCT GGGCGCACAA GGCCGGACCG
GACGGCGCGC CCTGGCGCCG CGCCACCGCG CAGCTGATCG CGCGCGGCGC GGCGGAGTTC
GCCGCCTTGA ACGTCGCCGA CGCCACCGCC CGGCTCTCCG CCGGCTTGGC GGAGCTGGCC
GCGCTCGACA TCGAGCCGGT CGGCTTCCAC CCGCCGGGCT GGCTCGCCTC GCCCGGGTCG
TACCAGGCGC TGCGCCGCGT CGGGATCCGG TATTCGAGCT CTCACTTGTT CGTCCACGAC
CTGATCACCG AGCAGCGCTA CACGCTCCCG GCGCTCTCGC ACCGCCCCGG CGGGACCGGC
GAGGTCTTCG CCGCCCGCAT GATGCGCAAG ACCGCGTCCG CGATGATCCG GCGCGGCCGC
TCGTTCCGGG TCGCCATGCA CCCGGACGAC TTGCGGCACC CCGGACTGCG CGCGACCACC
TTGGCCGTCA TCGACGCCGC GCTCGCCGCC GGGTATCAAC CCAGCACCTA CTCCGGGCTC
GTGATGCGCC GCGCAGCGGT CCCCCTGTCG TGA
 
Protein sequence
MPRPHLLVSI HDIASASAAP SERWLADLDA RGIPGTLLVI PGPWRGVRLS QNLDLVATLH 
DAASRGHELA LHGWAHKAGP DGAPWRRATA QLIARGAAEF AALNVADATA RLSAGLAELA
ALDIEPVGFH PPGWLASPGS YQALRRVGIR YSSSHLFVHD LITEQRYTLP ALSHRPGGTG
EVFAARMMRK TASAMIRRGR SFRVAMHPDD LRHPGLRATT LAVIDAALAA GYQPSTYSGL
VMRRAAVPLS