Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3280 |
Symbol | |
ID | 8334633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3618206 |
End bp | 3618904 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644956425 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003114028 |
Protein GI | 256392464 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.798057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACACG TCACGCTGAT CACCGGCGGT TCGAGCGGCA TCGGGGCGGC GACGGCGCGC GCCCTGCTCC AGCAGGGACA CCGGGTGGCG GTCACCGGTC GCGACGGCGA CCGGCTGGCG GCCTTCGCCG CCTCCGCCGA CGCCGGGGAG CAGCTGCTGA CCGTCAGTGG CGATGCCGGC GACGCCACCG ACGTCGCCTC GGTCGTCAAC GAGGTCATCG GTCGTTGGGG ACGGCTGGAC ACTGTGATCG CCAACGCCGG CTTCTCCCTG CCCGGGACGC TGGAGGACCA CGACCCCGAG GCGATGCGTG CCATGGTCCT GACCAACGTC CTCGGCCCGG CTCTGCTGGT GCGCCAGACG CTGCCGTACC TGCGCGAGTC CAAGGGACGG ATCGTGGTCG TCGGATCGGT CGCCGGTATT CGGAACACGC CCGGAAACCT TTACTCCGTC ACGAAGTGGG CCGTCCACGC GCTGGTCGAG AACGTCCGGC TGCTGGTCGC GAAGGACCGG GTCGGCGTCA CGCTCGTCGC CCCCGGCGTG GTGGACACCC CGTTCTGGGA CGAGCGCGGC GGATCTCCGC AGGCGGCTCC AGCGCTGACC GCCGAGCACA TCGCCAATGC CATCCTGTTC GCGGTCAACC AGCCGGAGGG CGTGGACGTC AGCCAGCTCG TGGTGCGCCC GACCGGTCAG CTCGGCTGA
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Protein sequence | MEHVTLITGG SSGIGAATAR ALLQQGHRVA VTGRDGDRLA AFAASADAGE QLLTVSGDAG DATDVASVVN EVIGRWGRLD TVIANAGFSL PGTLEDHDPE AMRAMVLTNV LGPALLVRQT LPYLRESKGR IVVVGSVAGI RNTPGNLYSV TKWAVHALVE NVRLLVAKDR VGVTLVAPGV VDTPFWDERG GSPQAAPALT AEHIANAILF AVNQPEGVDV SQLVVRPTGQ LG
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