Gene Caci_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3236 
Symbol 
ID8334589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3571733 
End bp3573016 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content72% 
IMG OID644956381 
Producthypothetical protein 
Protein accessionYP_003113984 
Protein GI256392420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.659937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC TCGCCGCCTA TCTGGCCGCG GTGGTGCTGG TGGCCCTGGC CGCCTGGGCG 
ATCGCGATCG AACGGCCCGG CGCCCGGCAC CCGATCCGCT GGGCCGGTTT GGCGTTCGTG
CTGTGCGAGG GCTGCTCGAT GGCGTTGCTG GCACCCGGCA CCGTCGCTTT GAGCGACACC
GGCGCCGACG GGCTGTCGGT GATCGCCCTC GGCGACACCG TGCGCACCGC CGCCTTGAGC
TTCCTGATGC TGTTGGCCTG CCTGGTCAAC CCGCGCCCGG CACGCCGCCG CTCGCCGGCG
GTCCAGGCCG TCCTCGCGGT CTGGCTGCAG GTCGCGATGG TGCTGCTGTT CATCGCCGCC
CGCCCGACCC TGCAGACCGA CGGCACCCTG ACCGCCGGCC CGGCCGGGCG CTGGCCGCTG
GCGGTGCGGG TGGCGCTGTT CGCGGCGTAC GCCATCTGGT CCCTGATCGA GCTGTTCGTC
GCGGTGCTCC CCCAAGCCCG GCTGGCCGCG ACCGGTCCGC TGCGCTGGGG TGGACGGCTG
GTACTGGCCG CGGTGTGCGT CGGCGTGGTG TGGACGCTGT GGTCGTACGA CGACATCGTC
CACGTGCTGC GCTATGGCAG CGTGGACGGC AGCGAGGACA CGGTGTCCAA TGCTTTGGGC
GCGGTGTGCG CGACGCTGGT GGCGACCGGC TCGCTGATCG GCAAGTGGAG CGTGACGTTC
CAGGCCGCGG CGCGCTGGCT GCGTTTGTGC CGCTGCTACC TGGTGATGGG ACCGCTGTGG
TCGGCGCTGC GCACGGCGAT GCCGCAGATC GCCTTCCCCG AGGGCGGCCG TCCGCTGCTG
GCCGGATGGC CGGCGGGGAT CGAGTTCGCG TTGTACCGGC GGGTCATCGA GATCCACGAC
GGACGGCTGG TGCTGCGCGC GTACCACCAT CCGGAGGTGG CCTCGTGGCT GGAGCAGGCC
GGACCGAGCG AGGTGGACAC GCCGCGCGGT GTCGTCAGCC GCCGCGCCGA TGCCAAAACC
ATTCCCGCCG ACGCCGACGC CGACGCCGCG CTCGTCGAGG CGGCGACGAT CGCCGCCGCT
TTGGAGAACA TGCGCCGCGG ACGCCGTTTC ACCGCCACCG CCACCGCCGA GGCGACGTCC
CGCAAAGCCT CGACGGTCAG CGTCGATGTG ATCCCGACCG ACCTGGACGC CGAGGTGCAG
TGGCTGTCAA GGGTCGCGTG GGCGTTCCGG CGCTCGCCGA TGATTCCGGT GCTGCTGGAA
CGGTTGCGCG CCGAGGAAGG GTGA
 
Protein sequence
MSDLAAYLAA VVLVALAAWA IAIERPGARH PIRWAGLAFV LCEGCSMALL APGTVALSDT 
GADGLSVIAL GDTVRTAALS FLMLLACLVN PRPARRRSPA VQAVLAVWLQ VAMVLLFIAA
RPTLQTDGTL TAGPAGRWPL AVRVALFAAY AIWSLIELFV AVLPQARLAA TGPLRWGGRL
VLAAVCVGVV WTLWSYDDIV HVLRYGSVDG SEDTVSNALG AVCATLVATG SLIGKWSVTF
QAAARWLRLC RCYLVMGPLW SALRTAMPQI AFPEGGRPLL AGWPAGIEFA LYRRVIEIHD
GRLVLRAYHH PEVASWLEQA GPSEVDTPRG VVSRRADAKT IPADADADAA LVEAATIAAA
LENMRRGRRF TATATAEATS RKASTVSVDV IPTDLDAEVQ WLSRVAWAFR RSPMIPVLLE
RLRAEEG