| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3233 |
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| Symbol | |
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| ID | 8334586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3567977 |
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| End bp | 3569893 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644956378 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003113981 |
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| Protein GI | 256392417 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0239273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTGGA ATCGGGGCAC GCTGGAGGCC GTCGGCGGCG GGACGCGGGT GGGGGAAGCC
GACTGGGCGG CGCAGGCCGC GCCGGCCGCA CCGGACGCGC CGGACGAGTC GAGCTACTGG
CGGCGCTACG GCGCGCACGT GCAAGCCGAC GGCGTCCAGT TCGCGGTGTG GGCGCCGAAC
GCTCAGCAGG TGAACGTCGA GGGCGACTTC AACGACTGGA ATCCGCACCG CGGCGTGGAG
CTGCGGCGCG ACGACTTCGG GCGCTGGACG GGCTTCGCCC CCGACGCCCG AGCCGGCCAC
CGCTACAAGT ACAAGATCCT CGGCCGCGAC GGGGTGTGGC GGCTGAAGGC TGATCCGGTG
GCGTTCGCCG CCGAGACTCC GCCCGCCTCG GCGTCGGTCG TGTTCCAGTC GCGGCATCAG
TGGGCTGACG AGGCCTGGAT GGCGCGCCAC CGCGGCGGCG AGCGCTACTC GTTCAACCAG
CCGATGTCGG TGTACGAGGT GCACCTGGCA TCGTGGCGGC CCGGGCTGTC CTACGACCAG
CTCGCCGAAC AGCTGGTCGG ACACGTCGCC GGGCTCGGCT TCACGCACGT GGAGTTCCTG
CCGGTGATGG AGCACCCCTT CGGGGGATCG TGGGGATATC AGACCACTGG CTTCTACGCG
CCGACCGCAC GCCTCGGCGA CCCCGACGGA CTGCGGCGGC TCATCGACGC CTTCCACCGC
GCCGGAATCG CGGTCATCCT GGACTGGGTC CCGGCGCACT TCCCGCGCGA CGACTGGGCT
CTGGCGTGGT TCGACGGCGC GCCGCTGTAT GAGCACCCTG ACCCGCGCCG CGGCGAGCAT
CCGGACTGGG GCAGCCTGAT CTTCGACTTC GGGCATCCGG AGGTACGCGA CTTCCTGATC
GGCAGCGCGA TGTACTGGAT CGAGGAGTTC CACGCCGACG GACTCCGGGT CGACGCCGTG
TCCTCGATGC TGTTCCTGGA CTACTCGCGC GCGCCCGGAA CCTGGGAGCC GAACTGCTTC
GGCGGCAACG CGAACCTGCA AGCGCTCGAC TTCATCAAGA TGCTGACGAA CGAGATGCAC
GCACGGCACC CCTCGGTGGT CATGGTCGCC GAGGAGTCGG CGGCCTGGCC GGGAGTCACG
CACCCGGTCG CCGACAACGG GCTCGGCTTC GACGTGAAGT GGAGCCTGGG CTGGATGAAC
GACACACTCG AGGCCCTGAC CATCGACCCC CTCTTCCGCC GCTACCACTG GGACGACCTA
CGGCGCCCCT CCGCCTACGC CTTCATGGAA CGCGACCTGC TCCCCCTCTC GCACGACGAG
GTGGTGCACG GCAAGGGCTC ACTGGCCGCC AAACTCCCCG GCTGGCGCGG GCAACAGAAG
GACGGACTGC GCGGACTGCT GGCGTACCAA TGGGCCTTCC CCGGCAAGCA CCTGCTGTTC
ATGGGCGCGG AGTTCGCCCA GCGCGGCGAA TGGAGCGAGC AGTGGGGACT GGACTGGGCC
GACGCCGCCG ACGGCGACGG CGTCACCCGC CTGGTCGCCG AGATGAACCG CCTCTACCAG
GCCCACCCCG CCCTCTGGTC CCGCGACGAC GACCCCGGCG CGACGCACTG GGGCGTCGGC
GACGCCGACG GCAACCTGAT CTCCTTCGTC CGCTACGGCC GCGCCGAAGA CGCCCTGGTC
TGCATCACGA ACTTCTCCGG CCACCAGATC CGCGACCGCC GCATCGGCCT CCCCTGGGGC
GGCACCTGGC ACGAAGTCCT GAACACCGAC GCACACGACT ACGACGGCGC CGGCGTGGGC
AACCTCGGCG CAGTCACGGC CGACCCGACG CACGGCCAGG ACTGGCTACC GGCTTCAGGA
GCGGTGACGA TCGGACCGTA CGCGACGGTC TGGCTCGCCG GGCGGTACGA GGACTGA
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| Protein sequence | MTWNRGTLEA VGGGTRVGEA DWAAQAAPAA PDAPDESSYW RRYGAHVQAD GVQFAVWAPN
AQQVNVEGDF NDWNPHRGVE LRRDDFGRWT GFAPDARAGH RYKYKILGRD GVWRLKADPV
AFAAETPPAS ASVVFQSRHQ WADEAWMARH RGGERYSFNQ PMSVYEVHLA SWRPGLSYDQ
LAEQLVGHVA GLGFTHVEFL PVMEHPFGGS WGYQTTGFYA PTARLGDPDG LRRLIDAFHR
AGIAVILDWV PAHFPRDDWA LAWFDGAPLY EHPDPRRGEH PDWGSLIFDF GHPEVRDFLI
GSAMYWIEEF HADGLRVDAV SSMLFLDYSR APGTWEPNCF GGNANLQALD FIKMLTNEMH
ARHPSVVMVA EESAAWPGVT HPVADNGLGF DVKWSLGWMN DTLEALTIDP LFRRYHWDDL
RRPSAYAFME RDLLPLSHDE VVHGKGSLAA KLPGWRGQQK DGLRGLLAYQ WAFPGKHLLF
MGAEFAQRGE WSEQWGLDWA DAADGDGVTR LVAEMNRLYQ AHPALWSRDD DPGATHWGVG
DADGNLISFV RYGRAEDALV CITNFSGHQI RDRRIGLPWG GTWHEVLNTD AHDYDGAGVG
NLGAVTADPT HGQDWLPASG AVTIGPYATV WLAGRYED
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