Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3152 |
Symbol | |
ID | 8334505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3464174 |
End bp | 3465364 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644956299 |
Product | putative signal transduction histidine kinase |
Protein accession | YP_003113902 |
Protein GI | 256392338 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.807347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.708256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGAGGG GCGCGCAGGC GGCGGGGCGG TTCGCGGGGC GTGCGGGGAT CCCGGGCCGG CCGGTCCGGG GATGGCTGGT CCGGGAACGG CTGGACGACG GGGCTGAGTA CGTAGTCGCA CTTCCGCTGG CGTTCCAGAT CGGGGTCCTG CCCGCCGCGG CGCTGGTATA CGTAGGTAGT TTCGGCGGCT CCGGAAGCGG GACGGTTCTG GGCCTGTGCG CGGCCCTGAT CCTGGCGACA GGCGCCCTGT GGCTCGGCGC GGCGCGCGGC GTCCCGACGC GGACGGTGCT CGGCGCCGAC AGCGCGCTGG CGATCGCCGG GAACCTCGCG ATGAGCACGG TCTCGGCGCC TTCGGCGCGT GCGGCCGAGG TGTCGTGGCA GTACTTCGCG GGCTGCGTCG CGTTGTGGAC CCTGGCGCGA GGAGTCGCGG GCGGGCTGGG CGCAGTGGCG GTCGGCGCGG TAGTGCGGTC GGCGATGTTC GCCGGGACCG GATCGGGCGT GGTCGTACCG GTGTTCCTCG GCGACGTCGC GGTACTGCTG ATCGCGGTGC TGATGGCGGC CGGGGTGCTG GCGCTGCTGC ATCGCGACGC CGAGCGGCTG CGGACCGGGG TGCGGCGGTC GCTGCACGAC ACGGTGTTGC AGACCCTTGA GGCGATCGCG CTGACGCTGC CGGGCGACGC GGAGAACGCG GCGCGGCGGC TGCGGGAGGT GCGCGCGATC GCGCACGCCG AGGCGGTCGC GCTGCGGCGG GAACTGTCGC GGCGCTCCGA GGCGCGCACG ACGCCGGGCG TGGTCGAAGG GCTGGTCGCG CTCGGCACGG AGCTGGCGCG CGAGGGCTTG CGGATGCGGC TGGACGCGGC CGAGGGCGTG GACGGCGACG ACGGGCTGAC GCCGCAGCGC CGGGCCGCGG TGCTGGCGGC GGCCCGCGAG GCGCTTCGCA ATGTGCTGAA ACACTCCGGC GTCGGCGAGG CGCTGGTGCG GGTCTGGGAC GAGCCGGACG GGCTGACGCT GGTGGTGCGC GACTTCGGGG TCGGCTTCGA CCCGGAGGCG CACCGGCCGG GCTTCGGCCT CAGCGAGTCG GTCGCCGCCC GGATGGCGGA GGTCGGCGGG ACGGCGGGCG TCGGGTCGCG GGTGGGCAAC GGCACGTCGG TGACACTGTG GGTGCCCGTG GCGGGCGAGG AGCCGGGATA A
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Protein sequence | MLRGAQAAGR FAGRAGIPGR PVRGWLVRER LDDGAEYVVA LPLAFQIGVL PAAALVYVGS FGGSGSGTVL GLCAALILAT GALWLGAARG VPTRTVLGAD SALAIAGNLA MSTVSAPSAR AAEVSWQYFA GCVALWTLAR GVAGGLGAVA VGAVVRSAMF AGTGSGVVVP VFLGDVAVLL IAVLMAAGVL ALLHRDAERL RTGVRRSLHD TVLQTLEAIA LTLPGDAENA ARRLREVRAI AHAEAVALRR ELSRRSEART TPGVVEGLVA LGTELAREGL RMRLDAAEGV DGDDGLTPQR RAAVLAAARE ALRNVLKHSG VGEALVRVWD EPDGLTLVVR DFGVGFDPEA HRPGFGLSES VAARMAEVGG TAGVGSRVGN GTSVTLWVPV AGEEPG
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