Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3132 |
Symbol | |
ID | 8334485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3440939 |
End bp | 3441649 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644956279 |
Product | protein of unknown function DUF218 |
Protein accession | YP_003113882 |
Protein GI | 256392318 |
COG category | [S] Function unknown |
COG ID | [COG2949] Uncharacterized membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGCA TCCAGCCGCG CAGGTGGCTG CCCCGGACCC GCAAGAGCCA GCGCCGGCTG TACCAGGCGG CGGCGCTCGC GGTGGTGCTC ATGTTCGCGC CGGTGACCGC CGTCCACGCC TACGCGTCCC CCTATCAGCG CAGTGCGGCC GCGGTTCCCT ACGAGCCGGT CGCGATCGTC TTCGGCGCCG GAGCGCCCGG CGGCAGGCCT TCGCCGTACC TGTCCCGCCG CCTGGACGTC GCCCTGGACC TGTACCGGCG CGGCAAGGTG ACGGTCATCC TGGTGACCGG CGACAACTCC CAGCCGGACT ACGACGAGCC GTCCGCGATG CGGCAGTACC TGGTGGAGCG CGGAGTGCCG GCGGCGCGGA TCGTGCGGGA CTTCGCGGGC TTCGACACCT GGGCCTCCTG CGAGCGCGCC AAGAAGATCT TCGGGGTCGA CCACGCCACC CTGGTGACGC AGGACTTCCA CCTGCCCCGC GCGCTGCTGC TGTGCCGCGC CGCCGGCATC GACGCCTACG GCGTCGCCGA CACCGGCGAG TCGGCGGCCG GCGAGGACGA GCTGGTGAAC GACTCGGCGC GCGAGGTCCT GGCGGGCATC AAGGCCTGGG GACAGGCGGT GTTCCAGCCG CAGCCGGTGC TCGGCAAGAA GGAGACCAGC GTGGCGACCG CGCTCGCGGC GGCGAAGGGC GCGCGCAGCT CGCCGGGATG A
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Protein sequence | MTRIQPRRWL PRTRKSQRRL YQAAALAVVL MFAPVTAVHA YASPYQRSAA AVPYEPVAIV FGAGAPGGRP SPYLSRRLDV ALDLYRRGKV TVILVTGDNS QPDYDEPSAM RQYLVERGVP AARIVRDFAG FDTWASCERA KKIFGVDHAT LVTQDFHLPR ALLLCRAAGI DAYGVADTGE SAAGEDELVN DSAREVLAGI KAWGQAVFQP QPVLGKKETS VATALAAAKG ARSSPG
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