Gene Caci_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3132 
Symbol 
ID8334485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3440939 
End bp3441649 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content74% 
IMG OID644956279 
Productprotein of unknown function DUF218 
Protein accessionYP_003113882 
Protein GI256392318 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCA TCCAGCCGCG CAGGTGGCTG CCCCGGACCC GCAAGAGCCA GCGCCGGCTG 
TACCAGGCGG CGGCGCTCGC GGTGGTGCTC ATGTTCGCGC CGGTGACCGC CGTCCACGCC
TACGCGTCCC CCTATCAGCG CAGTGCGGCC GCGGTTCCCT ACGAGCCGGT CGCGATCGTC
TTCGGCGCCG GAGCGCCCGG CGGCAGGCCT TCGCCGTACC TGTCCCGCCG CCTGGACGTC
GCCCTGGACC TGTACCGGCG CGGCAAGGTG ACGGTCATCC TGGTGACCGG CGACAACTCC
CAGCCGGACT ACGACGAGCC GTCCGCGATG CGGCAGTACC TGGTGGAGCG CGGAGTGCCG
GCGGCGCGGA TCGTGCGGGA CTTCGCGGGC TTCGACACCT GGGCCTCCTG CGAGCGCGCC
AAGAAGATCT TCGGGGTCGA CCACGCCACC CTGGTGACGC AGGACTTCCA CCTGCCCCGC
GCGCTGCTGC TGTGCCGCGC CGCCGGCATC GACGCCTACG GCGTCGCCGA CACCGGCGAG
TCGGCGGCCG GCGAGGACGA GCTGGTGAAC GACTCGGCGC GCGAGGTCCT GGCGGGCATC
AAGGCCTGGG GACAGGCGGT GTTCCAGCCG CAGCCGGTGC TCGGCAAGAA GGAGACCAGC
GTGGCGACCG CGCTCGCGGC GGCGAAGGGC GCGCGCAGCT CGCCGGGATG A
 
Protein sequence
MTRIQPRRWL PRTRKSQRRL YQAAALAVVL MFAPVTAVHA YASPYQRSAA AVPYEPVAIV 
FGAGAPGGRP SPYLSRRLDV ALDLYRRGKV TVILVTGDNS QPDYDEPSAM RQYLVERGVP
AARIVRDFAG FDTWASCERA KKIFGVDHAT LVTQDFHLPR ALLLCRAAGI DAYGVADTGE
SAAGEDELVN DSAREVLAGI KAWGQAVFQP QPVLGKKETS VATALAAAKG ARSSPG