| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3085 |
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| Symbol | |
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| ID | 8334437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3389234 |
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| End bp | 3389911 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644956232 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003113835 |
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| Protein GI | 256392271 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.416296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.12861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACGTCC TGAGCCAAGC CTGGGGCTGG CTGACCACGT CGGCGAACTG GAGCGGGTCC
GACGGCATCC CGACCCGGTT CCTGCAGCAC TTCGAGTACT CGGTCGAAGC GGTGCTCATC
GGAGCCCTGA TCGCCTTCCC GATCGGCCTG CTGACCGGGC ACGTCAAGCG CGGCGGACTG
GTGGTCAGCG CACTGGCGAA CGTGGCGCGC GCCCTGCCGA CCCTGGGCCT GGTCGTGCTG
CTGGTGGTGG TCATGGGCGT GAAGTTCCGC GCCGTGATGA TCCCCCTGGT GGCGCTGACC
GTACCGCCGA TCCTGCTGAA CACCTACGAG GGCGTGCGGA ACGTGGACCC GCAACTCACC
GACGCGGCCA AGGGCATGGG CCTGCGACCG TGGCAGGTCC TGTGGCGCGC AGAGGTCCCG
GCGGCCCTCC CGCTGATCCT CACCGGTTTC CAGTTCGCGG CGGTGAACGC GGTCGCGAAC
ACGGCGATCG CGGCGTACTC CTCCTTCGGC GGCCTGGGCC GCTTCGTCAT CGACGGCCTC
GCGACCACCG ACTACGGCAT GGTCGCCGGG GGCGCGATCC TGATCGTGGT GGCGGCGATC
CTGAACCTGC TGTTCTTCGC CATCCTGCGC AGACTGCTGA TCTCGCCAGG ACTGAGGCAG
GACAAACAGA CCGTTTAA
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| Protein sequence | MNVLSQAWGW LTTSANWSGS DGIPTRFLQH FEYSVEAVLI GALIAFPIGL LTGHVKRGGL
VVSALANVAR ALPTLGLVVL LVVVMGVKFR AVMIPLVALT VPPILLNTYE GVRNVDPQLT
DAAKGMGLRP WQVLWRAEVP AALPLILTGF QFAAVNAVAN TAIAAYSSFG GLGRFVIDGL
ATTDYGMVAG GAILIVVAAI LNLLFFAILR RLLISPGLRQ DKQTV
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