Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3025 |
Symbol | |
ID | 8334376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3342676 |
End bp | 3343854 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644956171 |
Product | hypothetical protein |
Protein accession | YP_003113775 |
Protein GI | 256392211 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.971667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0981604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA CCTTCGGAGC TGTGTACCTG CGGATCTGGC GCGACCAGGA CTTCCGTGCA CTCAGTCACA CCGAGCAGTA CCTGTACTGG ACGTTGATCT TTCAGCCCAA GCTCAACCGC GCCGGCCTGC TGGAGTACTC CCCGCGTCGA TGGGCCGACG TCAACAACGA CCTCTCGGTG CACGATGTCG AGGTCACCAT CAAGAGCCTG GAGCAGCGCC ACTACGTCGT CCTGGACGAG TCCACCAACG AGCTGCTGAT CCGCACCTAC GTCCGCAACG ACGAGGCGTG GAAGCAGCCG AAAGTCATGG CCTCTGTCGT TTCGGCTGCG AATGAAATCG AGTCGCCGCG GCTCCGGAGG GCGCTGTACG ACGAGTTGGA CCGCATCCCG GTTCGGGAAT TGTCCGACTC CCCCGGGCTT AATGGCGGAC CTTCAGTCCG GTCGAAGATT GAGAAGTCGA TTGCTCAATT GAGGGTCATC CTCGGCGGCA ACGGACCGGA CGGATCGGAT GGGTTCCGAC CCCCAGCCGA TACCCCACCG GAAGGGTATC GGACGGCTAC CGATACCCCT GAGGTACCCG AAGGCAGGGC TACCGATACC CGTGTCAATA CCGCAGCGGT AGCCACTAGT CATAGACCTG CTCCAGAACC TGCTCCAGAA CTAGAACCAG AACCGTTCGG CGCGCCAGCC GACGAGTCTG CTTCCGTCGC GCTGTTCGAA ACCGCACCTG CGGTGCGCGA CGACGATCCC GGCGAAGCGG CGCCCAAAGG ACCCGGCGCC TCCACCCTCG TTGCCGAATG GCTTGAATAC CGCGGCAAGC AGCGGCCCTC GTCGCGAATC ATCGGGCGCG TCGGAAAAGA ACTGAAAACC CTTCTCGCCG ACGGAATCCC TTACGAGATC GTGCGCGAAG GATTCATGGC CTGGGAGAAC AAGGGACTCG ACCCGGCAAA GATCGACTCC TGCGTCAACG AGGTCCAGTC CATCCTCCGG CGCCAAGCCG CTAGCTCCGG TGCGCAGCTT GCGCTGCCGT CAGGTGCCAC GGACGAGGCC GACAGCGACA ACGTCATCCA GTTCCGCCCC AACATCCCAG CCCCGCGCCC ATCCACCACT GACCGCGCCG TTGCCTCCGG CGACACCGCC CTTGCCGAGT TCCGGCGCAT GACGGGACGG ACCGCATGA
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Protein sequence | MARTFGAVYL RIWRDQDFRA LSHTEQYLYW TLIFQPKLNR AGLLEYSPRR WADVNNDLSV HDVEVTIKSL EQRHYVVLDE STNELLIRTY VRNDEAWKQP KVMASVVSAA NEIESPRLRR ALYDELDRIP VRELSDSPGL NGGPSVRSKI EKSIAQLRVI LGGNGPDGSD GFRPPADTPP EGYRTATDTP EVPEGRATDT RVNTAAVATS HRPAPEPAPE LEPEPFGAPA DESASVALFE TAPAVRDDDP GEAAPKGPGA STLVAEWLEY RGKQRPSSRI IGRVGKELKT LLADGIPYEI VREGFMAWEN KGLDPAKIDS CVNEVQSILR RQAASSGAQL ALPSGATDEA DSDNVIQFRP NIPAPRPSTT DRAVASGDTA LAEFRRMTGR TA
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