Gene Caci_2767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2767 
Symbol 
ID8334116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3176050 
End bp3176832 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content76% 
IMG OID644955915 
ProductABC transporter related 
Protein accessionYP_003113521 
Protein GI256391957 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCC TCGACGTCCA GGGCCTCACC GTCGCCTACG ACCGGCGCCG GAACGTGCTG 
ACCGACGTGG CGCTCAGCGT CGGCGTCGGC GAGATCGTCG GCGTGGTCGG CGAGACCGGT
TCGGGCAAGA CCACGCTGGC GCGCGCTGTC GCCGGGCTGG TTCCGGTCCG GGCCGGCACG
ATCGGCTTGG CGGGCACCGA CCTGGCCGGG CTGCGGGGGC GGGCGCTGCG CGACTTCCGC
CGCACCGGGC GGCTCCAACT GGTCTTCCAG GATCCGCTGC GGGCGCTGGA CCCGGATTGG
GACGTCAGTG CCCTGGTCGG GGAGCAGCTG GCGGTGGCCG GGACGGTTCC CGTCGCCGAG
CGTGCCGAGC GAGTCGCGGA CGCCTTGCGC GCCGTGGGCC TGGACCCGGG GCTGGCCGTA
CGCCGTCCCG CGCAACTGTC CGGCGGACAG CGCCAGCGCG TCCTGCTGGC CCGGGCCCTG
GTCGGCAAGC CCGCCCTGCT GATCGCCGAC GAACCGGTCA GCGCTCTGGA CGCCACGTCG
CGCAACGACG TCCTGGCTCT GCTGGCCGGG CTGCGGGAGC ACTCCGGCAC CTCGCAGCTG
GTGATCTCGC ACGACCTGCC CTCGCTGGCG GGCCTGGCCG ACCGGATCGC GGTGCTCTAC
CGCGGCCGGA TCGTCGAGCA CGGCCCGGTC CGGCGCGTCC TGGAAGAACC CTCACACCCG
TACACCGCGC GGCTGGTCGC CGCGACGCCC CGGCTGCGCC GCCTCCGCCC GGCCGCCGCC
TGA
 
Protein sequence
MTLLDVQGLT VAYDRRRNVL TDVALSVGVG EIVGVVGETG SGKTTLARAV AGLVPVRAGT 
IGLAGTDLAG LRGRALRDFR RTGRLQLVFQ DPLRALDPDW DVSALVGEQL AVAGTVPVAE
RAERVADALR AVGLDPGLAV RRPAQLSGGQ RQRVLLARAL VGKPALLIAD EPVSALDATS
RNDVLALLAG LREHSGTSQL VISHDLPSLA GLADRIAVLY RGRIVEHGPV RRVLEEPSHP
YTARLVAATP RLRRLRPAAA