Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2725 |
Symbol | |
ID | 8334074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3121002 |
End bp | 3122297 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644955875 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003113481 |
Protein GI | 256391917 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGCA TCATCATCAG GAACGACGAT CTGCGGTCCG TCCGGGCGCC GGTCTGCGGG GTGACCGACC GCTTGACGCG GTCGCGCAGG TCCTGGCTGG CCGGCCGGCT GGAGAGTGGG ATCGGCCACG CCGACGCGGC GTTCCGCACG GACTGCACGG AGTGCGCCGA ACCATGCAGC CAGTACGCAG GGCTCTGGCT GGCCATGCTG CTGTCTCAGA TCCGCCGCGT CGACCGGGCC GTCCGGGCCC TCGACGCGGT CGACATATCC GCGGCCGCGC GCGGCGACCG GCCGCTGGCC ACCGCCGCGA CGCTGGTCCG CGCCAAGGTC GAGGCGGCGG CGGGCCGTTT CGACACCGCG ACCGCGCTGG CCGCCGCCGG CCTGCGGGAG GCGGAGGAGG TCGGCCTGAA GTCCTGGACT CCGCTCGGGA ACTTCGTGAT CGCGTTAACC GCCGTGCGGC AGGGCGACCT GGCCACGGCG CTCCGCTACG CGCAGCGGAT GGAGGAGGAC GCCGTCTTCG GCCGCAAGAT GCTGCCCCCG GGGCAGGCGG CCTGGGCAAT CCTGCAGATC GCCGAGGCCG AACAGGGCTG GGAGAAGGTC GCGGCGCGGG CCGCCGAGCT GCTGGACTCC GGCCACGTCA TCCGGCAGCT GCTGATCTCC GAACCGGCGG CGGCGCCCTG GCTGGTGCGG CTGATGCTCA AGTCCGGCGA GCGCGCTCTG GCCCAGGAGG GCGTGTGGGC CTCGCGCCGC CTGGCCGCGG TGAACCCCGG CGTCCGCTCC ACGGCCGCCG CCGCCCTGCA CGCCGTGGCG CTGTACGAGG CGGACATGGA GAAGCTCGCC TCCGCCGCGG AGCTGCACGT CGACCAGTGG GCGCGGGCCT CAGCGGTCGA AGACGTCGGC GCGGTGCTGA CCGACCGGAA AGGAGACCGG GGGCGGGCGG CGCTGATCCT GGAGGACGCC CGCGGCGCCT ACGCGCAGAT CGGCGCCCTG CGGGACGCGG CCCGCGTCAA GAGCAGGCTC AGGGGGATCA ACACCATCGT CCCGGCCCAG GACCAGGGAC TGCCGGCGAG CGGTGTCGCC GGACTGACCA GGACCGAGTA CGCCATCGCC AAGCTCGTCG CCGGCGGCCT GACCAACGGT CAGGCCGCCG AACAGTTGTA TCTGTCCCGG CACACCGTCG CCTTCCACCT GCGGAAGATC TTCCGCAAGC TCGGCGTGGC CTCCCGCGTC CAGCTCGCGA GGCTGTGGGC CGAGCTGGAC TCCGGCGGCG GCCTGGAGCC CGGGGCGGCC GGCTGA
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Protein sequence | MRGIIIRNDD LRSVRAPVCG VTDRLTRSRR SWLAGRLESG IGHADAAFRT DCTECAEPCS QYAGLWLAML LSQIRRVDRA VRALDAVDIS AAARGDRPLA TAATLVRAKV EAAAGRFDTA TALAAAGLRE AEEVGLKSWT PLGNFVIALT AVRQGDLATA LRYAQRMEED AVFGRKMLPP GQAAWAILQI AEAEQGWEKV AARAAELLDS GHVIRQLLIS EPAAAPWLVR LMLKSGERAL AQEGVWASRR LAAVNPGVRS TAAAALHAVA LYEADMEKLA SAAELHVDQW ARASAVEDVG AVLTDRKGDR GRAALILEDA RGAYAQIGAL RDAARVKSRL RGINTIVPAQ DQGLPASGVA GLTRTEYAIA KLVAGGLTNG QAAEQLYLSR HTVAFHLRKI FRKLGVASRV QLARLWAELD SGGGLEPGAA G
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