| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2720 |
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| Symbol | |
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| ID | 8334069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3115114 |
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| End bp | 3115881 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644955870 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003113476 |
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| Protein GI | 256391912 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGA CGCCGGACGG CACCGGAACC GTCGCGGTCG TCACCGGGGC GGCCCGGGGC
ATCGGCGCGG CCGTGGCGCT GCGGCTCGCG GCGGGCGGGG CGACCGTCGT CGTGGTGGAC
CGCGAGGAGC GGGACACGGC CGGGACCGTC GCGGCCGTGC GCCGGGCGGG CGGCCGGGCG
CTCGGCATCG GCTGCGATGT GGCGGTCGCG GCCGAGGTGC GGACGGCGAT GCTGCGGATC
GCGGCGGCCT ACGGGCGCCT CGACATCCTG GTGAACTGCG CTGGCGTCAC CCGCGACCGC
CTGCTCCTGG CCATGGACGA CCCGGAGTGG GACACAGTGC TGGACGTCAG CCTGGGCGGC
ACGATGCGCT GGTCCCTGGC GGCCGCCGAG CTCATGAAGC ACCGCGGCAC GGGCCGCATC
GTGACCTTCA GCTCGGTCGC GGCGGACGGC AACCCGGGCC AGAGCAACTA CGCGACCGCG
AAAGCCGCCC TCGCCGGCTT CACCCGCGCC CTGGCCTCCG AACTCGGCCC GCACGGCATC
ACCGTGAACG CGGTGGCGCC CGGCTTCGTC GCGACCCCGA TGGTCGCCGA ACTGGCCGAT
CGCCTCGGCG TGGACCGCGA GGCGTTCCTG AAGGAGGCGG CATCCCACGC GGCGGTCGGC
CGCGTCGGAA CGGTCGACGA CATCGCCGCC GTGGTGGCCT TCCTCACCGG CCGCGACTCC
GGCTACCTGA CCGGGCAGAC CGTGTCCGTC GACGGAGGCC GGCGATGA
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| Protein sequence | MSRTPDGTGT VAVVTGAARG IGAAVALRLA AGGATVVVVD REERDTAGTV AAVRRAGGRA
LGIGCDVAVA AEVRTAMLRI AAAYGRLDIL VNCAGVTRDR LLLAMDDPEW DTVLDVSLGG
TMRWSLAAAE LMKHRGTGRI VTFSSVAADG NPGQSNYATA KAALAGFTRA LASELGPHGI
TVNAVAPGFV ATPMVAELAD RLGVDREAFL KEAASHAAVG RVGTVDDIAA VVAFLTGRDS
GYLTGQTVSV DGGRR
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