| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2648 |
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| Symbol | |
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| ID | 8333997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3033926 |
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| End bp | 3035146 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644955799 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003113405 |
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| Protein GI | 256391841 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.401999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGACCA TCAACCGAGT GCGGGTCGGC GCGGTCGTCG TCGCCGCCGT GCTCGCGCTT
TCGGCGTGTG CCGGCAGTTC GTCGAAGTCC GGGAACACGG GCTCCTCGAC GTCTGCCGGG
AGCAGCAGCT CGACCGGTTC CAATCGGACC AAGCCCACGC TGGAGATCGG CGTGCAGGGC
CCGCTGTCGG GCGCCTACCA GGCGCTGGGG CTGAACATCG ACTGGGGCGC CAAGCTCGCC
GTCCAGGAGG AGAACGCCAA GGGCGACCTG CCGTTCAATT TGGCCATCAA GGAGTCCGAC
GATCAGGGCG ACCAGTCCAA GGGCGCGACC GCGGCACAGC TGCTGATTCA GGACCCGAAG
GTGCTGGGCG TCGTGGGTCC GGCCTTCTCC GGTCCGACTG CCGCTGCCGG CGCGCTCTAC
TCCAGCGCGA ACCTGGTGGC GGTGAGCGTG GCGACGCGTC CGTCGCTGAC CAGCTCGGGC
TTCAAGACCT TCTTCCGCGT CGTGGCCAAC GACAGCGTGC AGGGCCCGGC AGCCGCCGAC
TACATCGCCA AGGTGCTCAA GGCGACCAAC GTGTACGTGG TCGACGACAA GTCGCAGTAC
GGCCAGGGCC TGTCGCAGGC GACCGTCGCC GAGCTGAAGA AGGACGGCGT CAAGGTCGAG
ACCGACAGCG CGGCGGCCGG TACCCAGGAC TACTCTCCGC TGGCCTCCAA GGTCGCCGCC
TCCGGCGCGC AGGCCATGTA CTACGCGGGC TACTACGCCG ACGCCGGGGT GTTCGCCAAG
GCGCTGAAGG GTGTGAGCTA CACCGGCACG ATGCTCGCCG GCGACGGATC GAAGGACCCG
AACTTTATCG CCACCGCCGG TGCCGACGCC GCCGCCGGCT GGCAGTTCAC CTGCCCCTGT
TTCGACCCCA CCACCGACCC GAAGTACGCG ACCTTCACCG CGGACTACAA GAAGCTCGCC
AACGCCGCTC CGGGCACGTA CTCGATCGAG GGCTACGACT CGGCGAACAC CATCATCAGC
GTGCTGAAGA GCCTGAACAC CGCCAACCCG ACCCGGCAGG CGGTGGCCGA CGGCGTGGGC
AAGGTCGACT ATCAGGGCCT GTCCAAGGAG ATCAAGTTCA GTCCCACCGG CGACGTCTCG
GGCACGTCGA TCTACGTCTA CCAGGTCAAG GGCGGCGCGA TCACGCTGCT CGGCGACATC
TCCAAGCTGA TCGGCGGCTG A
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| Protein sequence | MRTINRVRVG AVVVAAVLAL SACAGSSSKS GNTGSSTSAG SSSSTGSNRT KPTLEIGVQG
PLSGAYQALG LNIDWGAKLA VQEENAKGDL PFNLAIKESD DQGDQSKGAT AAQLLIQDPK
VLGVVGPAFS GPTAAAGALY SSANLVAVSV ATRPSLTSSG FKTFFRVVAN DSVQGPAAAD
YIAKVLKATN VYVVDDKSQY GQGLSQATVA ELKKDGVKVE TDSAAAGTQD YSPLASKVAA
SGAQAMYYAG YYADAGVFAK ALKGVSYTGT MLAGDGSKDP NFIATAGADA AAGWQFTCPC
FDPTTDPKYA TFTADYKKLA NAAPGTYSIE GYDSANTIIS VLKSLNTANP TRQAVADGVG
KVDYQGLSKE IKFSPTGDVS GTSIYVYQVK GGAITLLGDI SKLIGG
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