Gene Caci_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2643 
Symbol 
ID8333992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3026610 
End bp3028010 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content67% 
IMG OID644955794 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_003113400 
Protein GI256391836 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.685161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAC CGGTGAGCAG CGATCCGGCG GATCTTCTCG TGATCTTCGG TATCACCGGT 
GATCTGGCTC ACAAGATGAC GTACCGGGCT CTGTACCGGC TTGAACGCAG AGGCCTGCTG
GACTGCCCGA TCATCGGAGT GGCCGCTGAC GAGCTGTCCG AGGGAGAGTT GGCGGAGTCG
GCGCGCGCGG CGATCGCTGC CGGCGGCGAG ACGATCGAGG AGTCTGTCTT CGGACGCTTG
GCCAAGAGGC TGACATACCT GCACGGAGAC GTCACCGACG CCGAGGTGTA CCGGCGTCTG
GCCAAGAAGA TCGGCCGGAA CCACCGTCCG CTGTTCTATC TGGAGATGCC GCCCGCGCTG
TTCGGGCCGA TTGTGGAACG CCTCGACGAG GCGGGTCTGC TGGCCCAGGC GACCGTCGCG
GTCGAGAAGC CGTTCGGGCA CGATCTGGCC TCGGCGCGCG ATCTGAACGC GCGGCTGAGA
AAGGTCCTGC GCGAAGACCA ACTGCTCCGG GTCGATCACT TCCTGGGCAA GGAGCCGGTC
ATCGAACTGG AATATCTGCG GTTCGCGAAC CTCGCGCTGG CCAAGATCTG GGACCGGGAC
TCCGTCGCGG CGATCCAGAT CACCATGGCC GAGGACTTCG GCGTCCAGGA CCGCGGCGCG
TTCTACGATC CGGTCGGTGC TCTGCGCGAC GTCGTGCAGA ACCATCTGCT CCAAGTACTG
GCGCTGGTCA CGATGGAGCC GCCGTCGGGC CCGGGCGCGG ACGACCTGCG CGACAAGAAA
GCCGAACTGC TCAAGGCGGT CCGGGCAGCC GACCCGAAAC GCTGTGTGCG CGGCCAGTAC
GAGGGCTACA CCGACATCCC CGGAGTGGCG AAGGGGTCCT CGACCGAGAC GTTCATCGCC
TTGCGCCTGG AGATCGACAA CTGGCGGTGG GCCGGCGTCC CGATCTTCCT TCGGGCCGGC
AAGGAACTCC CGGAACGCCT CACAGAGGTG CGGCTGCTGC TGCGCCACAC CCCGCCGCTG
ACCTTCCTGC CCTCAGCGGC CCAGGTCGAG CAGAATCAGA TCGTCCTGCG CATCGATCCC
GATCCCGGGC TGCGACTCCA GCTGGCGGGG CGGAACGACC ACAGCTGGCG CTCCCTGCAC
CTGGACGACC GGTTCGCTCA GGATCTGGGC GAGCCCGCCG AGCCTTATGA GCGGCTCCTT
CACGCCGCCC TGACCGGCGA CCATCAGTTG TTCGCGCGCG AGGACGGCGT GGAGGAGACC
TGGCGCATCG TGCAGCCGCT GCTCGACGAA CCGCCGAAGG TCCACAGCTA CAAGCGCCGA
TCGTGGGGAC CGGCCGCGGC GTCCCGGCTG CTGCGCGGCC ACCCGCGGTG GCAGGAACCC
TGGGACGTCG AGAAGAGCTG A
 
Protein sequence
MPAPVSSDPA DLLVIFGITG DLAHKMTYRA LYRLERRGLL DCPIIGVAAD ELSEGELAES 
ARAAIAAGGE TIEESVFGRL AKRLTYLHGD VTDAEVYRRL AKKIGRNHRP LFYLEMPPAL
FGPIVERLDE AGLLAQATVA VEKPFGHDLA SARDLNARLR KVLREDQLLR VDHFLGKEPV
IELEYLRFAN LALAKIWDRD SVAAIQITMA EDFGVQDRGA FYDPVGALRD VVQNHLLQVL
ALVTMEPPSG PGADDLRDKK AELLKAVRAA DPKRCVRGQY EGYTDIPGVA KGSSTETFIA
LRLEIDNWRW AGVPIFLRAG KELPERLTEV RLLLRHTPPL TFLPSAAQVE QNQIVLRIDP
DPGLRLQLAG RNDHSWRSLH LDDRFAQDLG EPAEPYERLL HAALTGDHQL FAREDGVEET
WRIVQPLLDE PPKVHSYKRR SWGPAAASRL LRGHPRWQEP WDVEKS