| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2612 |
|---|
| Symbol | |
|---|
| ID | 8333961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2994832 |
|---|
| End bp | 2995860 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644955764 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003113370 |
|---|
| Protein GI | 256391806 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.109106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGTCA CGATCGCAGA TGTCGCCAAG CGCGCCGGCG TCTCCCGCAG CACCGTGTCG
TACGTGCTGA GCGGGACGCG CTCGATCTCG GCGGAGACCC GGCTGCGGGT CGAGGCGGCG
ATCGAGGAGC TGCAGTTCCG GCCGCACGCC GGGGCGCGCT CGATCCGCAG TGGGCGCAAC
GGGGTGATCG CGATGGCGCT GCCGATGGTC TACGGGCCGC ACAACCAGGT GCAGATGCCG
TACGTCTGGG CGACGCTGAC CGCGGCGCAG GACCTCGGGC TGAAGCTGCT GATGCTGACC
GACGACGACG GCGAGACGGC GATCCGGGAC ACGGTGACCG GCTCGCAGGT CGACGGGGTC
ATGCTGATGG AGGTGCAGCG CAACGACCCG CGCGTGGCGC TGCTCAGCTC CCTGAAGTGC
CCCGCGGTGC TGGTCGGGAC GCCCGATGAC AGCGCGCGGC TGCCGTACGT CGACTTCGAC
GCGACGCTGG CCGGCCGGCT GTGCGCCGAG CACCTGCTGG AGCTCGGCCA CCAGCGGGTC
GGCTACATCG GGCAGTCGCC GTCGACGTTC CGCCGCGACG TCGCCTACGC GGTCCACGCC
CGCGAAGGCG CGCTGAGCAC GCTGCGCAAG GCCCGGGCCC GTACCGCCTG GACGCCCTGC
GACGGGCACC CGGCCGACGT GGCGCGCGCC GTGGACAGCC TGCTCGGCAA GATCCACGGC
CTGACCGGCC TGGTCGTCTA CAACGAGCGG GCGCTGCCGC TGGTCCTGGA CCGGCTGGCC
GGGCTGGGCC TGCGGGTGCC GCAGGACGTC TCGGTCGTGG CGGTGTGCCC GGACGACGAG
GCCGAACGGC TCGCGGTACC GGTCAGCGCG GTCTCGCTGC CGGTGGAGGA CCTGGCCCGC
ACCGCCGTGA AACTGCTGGC CGGGCAGGTC AACGGGGAGT CCGTACCGTC GGTGACGATC
CTGCCGCCGA CGCTGAAAGT CCGCGCCACC ACCGGGCCGG CTCCCGCCGA CGGCTCCGAC
CGCGCCTGA
|
|---|
| Protein sequence | MAVTIADVAK RAGVSRSTVS YVLSGTRSIS AETRLRVEAA IEELQFRPHA GARSIRSGRN
GVIAMALPMV YGPHNQVQMP YVWATLTAAQ DLGLKLLMLT DDDGETAIRD TVTGSQVDGV
MLMEVQRNDP RVALLSSLKC PAVLVGTPDD SARLPYVDFD ATLAGRLCAE HLLELGHQRV
GYIGQSPSTF RRDVAYAVHA REGALSTLRK ARARTAWTPC DGHPADVARA VDSLLGKIHG
LTGLVVYNER ALPLVLDRLA GLGLRVPQDV SVVAVCPDDE AERLAVPVSA VSLPVEDLAR
TAVKLLAGQV NGESVPSVTI LPPTLKVRAT TGPAPADGSD RA
|
|---|
| |