Gene Caci_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2590 
Symbol 
ID8333939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2939067 
End bp2940260 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID644955743 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003113349 
Protein GI256391785 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.12114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGAACG GGCAGGCGAG AACCGCGGTC GCCGAGTTGG CCGCGGCGGT GCTCTCCCTG 
AGGCCGATGA TCGATCGGCT CGACGCCCCC GTCCGCGTCG CGGTGCCCGG CGGAGCCCGC
GGCGCGGTAC GCGGGCTCCA GACGATCGTG GACCGAGTGT GCGGACGCCT CGGCGCCCCG
GCGCTGGAAC TGGTCCGCTC CCCGGAGTCG GACCTGGATC CGTTCGGGGC GGCGGCCGGC
CGGCGGCTGG GTCTGGCCGA CTCGGGTGCG GCGCTGGCCG TGCTGTCCTC CGACGATCTG
CCGGACGTGG ACCGGGTCGT GGACGAGGCG GTCAGCGCCG ACTTCGACTC CTTCTGTGAG
CAGCGGACGG TGCGAGGTCC CGATGGTGTC GGCGTCCGCG CCTACGCCGC TGGCGATCCC
GACGCCCCGG CGGTGGTCAT CGCCTCAGCG TGCGGCATGC CGGCCCGGCT GGCCGAAGTC
TGGATCCGGC GGCTCGCCCG CGATCATCGA GTCCTGACAT GGGAGAGCCG CGGACTGTTC
TGCGGCTGCG AGGACTTCGC CGGAGCCACC GGCGTGCCCG CGCAAGCCGA CGACCTGATC
GCCGTCATGG ACGCCTTCGA GCTCGACCAG GCCCACGTCA TGGGACTGTG CGGGGGAGCG
GTGATCGCGA TCACCGCCGC CGCCGCGCAC CCGGACCGGA TCAGTTCCCT GAGTCTGTGG
CACGGCGATT TCGAACTCGG AGACCAAGCC CGTAAAACCG AGCACCAACG CAACCTGCAG
GCTCTGATGA CCATGGCGAC CCGCGCCAAG GTCAGCGCGG CCGGGGTGCA CGCGGTGCTG
TGCCGCTCGA TAGCGGCCTC GACCCCACCG GAGTTGGCGC ACCTGGTCCT GTATCCCTAT
GCGAGCCCTG ATCTCCTGTT CCGCTACTGC CTTCTCAACG GCGCGATCAT GGAGACCGAC
GTACGCCCGG AGCTGTCCGC GGTCGTGCAG CCCACGCTGG TGGTCACCAG CGAGGACGAC
ACCACCGCGC ATCCCGATGG CTCCCGTTAT GTAGCCGCCG CGTTGCCCGA CGCACGGCTG
CACGTGGTCC CCCACGGCGA CCACATATCC CTGTTCCAAG GCCCCCCCGA CCTGATCGAC
ACCGCTTCGC GCTTCATGGC CGAGAAATCT GACGTGAACC CTTCCCATCG GTGA
 
Protein sequence
MLNGQARTAV AELAAAVLSL RPMIDRLDAP VRVAVPGGAR GAVRGLQTIV DRVCGRLGAP 
ALELVRSPES DLDPFGAAAG RRLGLADSGA ALAVLSSDDL PDVDRVVDEA VSADFDSFCE
QRTVRGPDGV GVRAYAAGDP DAPAVVIASA CGMPARLAEV WIRRLARDHR VLTWESRGLF
CGCEDFAGAT GVPAQADDLI AVMDAFELDQ AHVMGLCGGA VIAITAAAAH PDRISSLSLW
HGDFELGDQA RKTEHQRNLQ ALMTMATRAK VSAAGVHAVL CRSIAASTPP ELAHLVLYPY
ASPDLLFRYC LLNGAIMETD VRPELSAVVQ PTLVVTSEDD TTAHPDGSRY VAAALPDARL
HVVPHGDHIS LFQGPPDLID TASRFMAEKS DVNPSHR