| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2566 |
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| Symbol | |
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| ID | 8333915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2905713 |
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| End bp | 2907263 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644955719 |
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| Product | extracellular repeat protein, HAF family |
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| Protein accession | YP_003113325 |
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| Protein GI | 256391761 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5563] Predicted integral membrane proteins containing uncharacterized repeats |
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| TIGRFAM ID | [TIGR02913] probable extracellular repeat, HAF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCGT CCGGCAGGCG TTCGGCAGGC GCCGTCGCCC GTGTCGCAGT ACTCTGCGCC
GCTCTGGTCG TGCCCGTCCC GTTCGCGGTA TCGGCATCGG CTGGTGTGGC CGGCGCGGCC
AGTGCGGCCA GTGCGGCCAC CGCGCCGCTC TCCACCATCA CCGACCTCGG CACGCTCGGC
GGTGATCTCA GCATCGCCAA CGGGATCAAC AACGCCGGGG TCGTCGTCGG CTACAGCGAT
CTGGCTTCCG GCACTCAGCA CGGCTTCCGC TGGTCCGGAG GGACCATGTC CGACCTGGGG
GTCGAGGCCG GGGGCGGGGA CAGTGTGGCG AACGCCGTCA ACGACGCCGG TCAGATCGCG
GGCCAAGCGA CGCGCGCCGA CGGCGGTTAC GCGTATCCGG TCCGCTGGAG CGCCGCCGGC
GTGCTGCAGG ACCTCGGCGG CCCGATCACC AACCGGCTGG GCGTCGGCAA CGCCATCGAC
CCCTCCGGCC GCGTCGCCGG CGGTCAGCGT CCGGCCGACT CCGAGGGCAG CCCGGAGGCG
ATCGTCTATG ACGCCGCCGG CAACCCCACC GAGCTGAGTA CGCCGACGCA GACCCTCAAC
GCGGCCACCG GCATCAACGC GCGCGGGCAG GTCGTCGGCG GTCCGGCGTT CGTCTGGCAG
AACGGGTCCC TGACCATGCT GCCGGTGCTG CCCGGCGGTC AGGGCGGATC GGCCAACGCC
ATCAACGTCT CCGGCACGAT CGTCGGCACC GTCAGCCGAA CCGGCACGCT CAGCGGTCTG
GACGCCGCGC TCTGGCAGAA CAACACCCTG ACAGACCTCG GCACGATCGA CGCGATCCAG
TACAACCAGG CGACCGCGGT CAACGCCGCG GGCCAGATCG TCGGTACCGC CGACCCCGAG
TGTCAGCCGT GCGCCGCACC GGAGGCGTGG CTGCGCCAGC CGGGCGGCGC GCTGACGAAG
CTGGACACGC TGCTCCCCGC CGGCTCCGGC TGGACCCTCC AATCAGCCAC CGGGATCAAC
GACCGCGGCC AGATCGTCGG CGTCGGCCTC CACAACGGCC ACAAGCGCGG CTACCTGCTC
ACCCCGGCGT TCGCCGCGAC CGTGAACTTC GAACCGGCCG GCTCGACGAT CCCGGTGGGC
TACGCGGCGG ACACCGGCGC CGCGTACGGT GCGCGGTCCG GCGGCCTGAC CTACGGCTGG
AACATCGACA ACTCCGTGAA CACGAGGGAC CGCAACGCCT CGAGCTCCCC GGATCAGCGC
TATGACACGC TGATCCACAT GGAGCGCAGC GGAAGCGCGA CGGTGTGGGA GATGGCGGTG
CCGAACGGCC ACTACACGGT GCACCTGGTC TGCGGCGATC CGTCGAACAC CGACAGCGTC
TACAAGGTCA ACGTGGAGGG CGTGCTCACA GTCTCAGGGA CGCCGAGCGC CGCCAGCCAC
TGGATCGAGG GGACCAGCCA GGTCACGGTC TCCGATGGCA AACTGACCAT CACCAACGCC
ACCGGATCGA GCAACGACAA GCTCGCTTAC GTGGACGTCA TCGCTTCCTG A
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| Protein sequence | MHSSGRRSAG AVARVAVLCA ALVVPVPFAV SASAGVAGAA SAASAATAPL STITDLGTLG
GDLSIANGIN NAGVVVGYSD LASGTQHGFR WSGGTMSDLG VEAGGGDSVA NAVNDAGQIA
GQATRADGGY AYPVRWSAAG VLQDLGGPIT NRLGVGNAID PSGRVAGGQR PADSEGSPEA
IVYDAAGNPT ELSTPTQTLN AATGINARGQ VVGGPAFVWQ NGSLTMLPVL PGGQGGSANA
INVSGTIVGT VSRTGTLSGL DAALWQNNTL TDLGTIDAIQ YNQATAVNAA GQIVGTADPE
CQPCAAPEAW LRQPGGALTK LDTLLPAGSG WTLQSATGIN DRGQIVGVGL HNGHKRGYLL
TPAFAATVNF EPAGSTIPVG YAADTGAAYG ARSGGLTYGW NIDNSVNTRD RNASSSPDQR
YDTLIHMERS GSATVWEMAV PNGHYTVHLV CGDPSNTDSV YKVNVEGVLT VSGTPSAASH
WIEGTSQVTV SDGKLTITNA TGSSNDKLAY VDVIAS
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