Gene Caci_2525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2525 
Symbol 
ID8333874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2855741 
End bp2856280 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content73% 
IMG OID644955678 
Productblue (type 1) copper domain protein 
Protein accessionYP_003113284 
Protein GI256391720 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.197814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.378736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA GAGTCGACCG GAGCCCCGGC GATCCCGGAC GGTCGCGCAT ACCGGCGCTG 
GCCGCCCTGG CCGTGGCCAC CCTCGCGCTG GCGACCGCCT GCGGCAGCTC CTCCCACCCA
GCCGCCGCGA GCGCCTCCAC CGCGATCCAG CCCGGCGGCG GCCAGTCGCT GGCCGGCGCC
CCCGGGGCGA CCGCCACCGG ACCGCTCGCC GACGGCACGG CGATGCCCAG CATGACCATG
CCCACGGCGA CCGGATCCTC CGGTGCGCCG GCGGCACCGG TCGCCGGGAA CGCCGTGGCG
ATCAAGGGGT TCGCCTTCTC CCCCGCCGCG CTGTCGGTGA AGGTCGGGAC CACGGTGACC
TGGACCAACC AGGATTCCGA CGCGCACACG GTGACGAGCC AGGGTTCGGG CGGGCCGTTG
AACTCGGCGG CGTTGGCCAC CGGTCAGACC TACTCGTACA CGTTCACCAA GCCCGGTACG
TACTCCTACC TGTGCACGAT CCACCCGTTC ATGACCGCGA CAGTGACGGT GACCCCGTGA
 
Protein sequence
MNPRVDRSPG DPGRSRIPAL AALAVATLAL ATACGSSSHP AAASASTAIQ PGGGQSLAGA 
PGATATGPLA DGTAMPSMTM PTATGSSGAP AAPVAGNAVA IKGFAFSPAA LSVKVGTTVT
WTNQDSDAHT VTSQGSGGPL NSAALATGQT YSYTFTKPGT YSYLCTIHPF MTATVTVTP