Gene Caci_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2501 
Symbol 
ID8333850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2827736 
End bp2828479 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID644955654 
Producthypothetical protein 
Protein accessionYP_003113260 
Protein GI256391696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0527834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACT TCGGGTTCAA GGTGCTGCCC GATGCGCCCG CGTTGACTGC GCGGCAGGAG 
CGCGGGCTGG CGCTGGGTGC GGTGTACGCG GTCGGCGACG ATCTGCCCAT CAATGCCCTG
ACGGCCGGCT CCGATCCGCA GAGCGCGGCG AAGGTCTTGG AGCAGGCGTG GGATGTCTAT
GACGCCCAGT CGGCGCGCGC CACCTACCGC TTCCTGCTCG AGGAGGGCGG GCACCGCGAT
GTCTACGCCT GCGTGCGCGG CTACCTGAAC GCGGGCTGGG ACCTCAGCCG CGCCGACGAG
CGGGCCCGGG TGGAGCAGGC GACGCGGGAG ATCCCGGCGA TCGCGATGCA GCGCGGTGAG
CGGCCAGATG TGGCGTTGAA CTACTTCCAG TCGGCGTGGC CGTCGCGGGC GATGATGCAG
GGGCACTACC CGCGGCGGAT CATCGAGAGC ATCGCCGCTT GGGACGCCGC GCGCGTGGTG
CACGTGAGCC GCTTCATCGT CGACGCCGGG TACCTGCCCG CGGACGAGGC GTGGGCGGCG
ATCGACGCGG CGGCGCGGAT GGTGCTGCCG GAGTATCCGT CGTGGGAGGA GTTCCAGCTC
GGCTTCCTGG CCGGGCGGGT CTTCTGGCAG TGCAACGGCA CGTTCGACGC GCAGGAGGTC
AGCGCCGACT ACCGGAGGTA CACAAGCAGC GGGAAGTCGT TGCTGAGCAA GGCGGACAGC
CCTTGGCAGC GCCTGCCCTG GTGA
 
Protein sequence
MVDFGFKVLP DAPALTARQE RGLALGAVYA VGDDLPINAL TAGSDPQSAA KVLEQAWDVY 
DAQSARATYR FLLEEGGHRD VYACVRGYLN AGWDLSRADE RARVEQATRE IPAIAMQRGE
RPDVALNYFQ SAWPSRAMMQ GHYPRRIIES IAAWDAARVV HVSRFIVDAG YLPADEAWAA
IDAAARMVLP EYPSWEEFQL GFLAGRVFWQ CNGTFDAQEV SADYRRYTSS GKSLLSKADS
PWQRLPW