Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2493 |
Symbol | |
ID | 8333842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2819081 |
End bp | 2819947 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644955646 |
Product | NmrA family protein |
Protein accession | YP_003113252 |
Protein GI | 256391688 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCC TCGTGATCGG CGCGACCGGC AAGACCGGCC GACCCGTGGT GGACGCCCTC GCCGCACGCG GTGCGAAGGT CGCCGCCGCC AGCCGCAATC CCGAAGCCGG ACGCGAACTC CCCGACGGCG TCACGCCGGT CCGCTTCGAC TGGGCCGACC GCACCACCTG GACCTCGGCC CTGGAGGGCG CCGAAGCCCT CTACATCGTC GGTCCCTACG CCCACCCCAC CGGCGAGCGC CTTGTCGCCG ACCTGCTCGC CGAAGCCCAC GACACCCACC GCGTCGTCCT GCTGTCGGTG ATCGGCGCCG AGCTGCTGCC GGTCGAGGCG ATGATGGCGC ACTGGGAGCG CGCCGTCCGC GCCTCCGGCA AGGAGTGGAC CATCCTGCAC CCGAACTGGT TCTTCCAGAA CTTCGGTACC GGATTCCTCC CCTCCCTGCG TGATCGCGGC GTCCTGCAAC TCCCCGCCGG CGACGCCCCA GTGAGCTTCG TCGACACCCG CGACATCGGC GAGGTCGCCG CCGCGGCGCT GACCGAGGAC GGCTACGCCG GCCAGGTGCT CACCATCACC GGACCCGACA GCCTGTCCCA CGGCGAAGCC GTCGCGATGC TGAGCGAAGC CTCCGGCCGT CCCCTGGCCT ACAAGCCCGT CGAGCCTGAG CAGGCGGAGG CGAACTCCCG CGCGGCAGGC GTGAGCGAGC GCACCATCAT CGCCCAGCGC GGTCTGTTCC AGGTCATCCG CGACGGCGGG AACGCCCCGG TGACCGACGT CGTCCAGCGC GTCACCGGCC ACGCGCCGCG CAGCTTCGCG CAGTACGCCG CCGAGCACGC CGACCTCTGG CGCGACGCCA CGAACTCAAC GAACTAG
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Protein sequence | MAILVIGATG KTGRPVVDAL AARGAKVAAA SRNPEAGREL PDGVTPVRFD WADRTTWTSA LEGAEALYIV GPYAHPTGER LVADLLAEAH DTHRVVLLSV IGAELLPVEA MMAHWERAVR ASGKEWTILH PNWFFQNFGT GFLPSLRDRG VLQLPAGDAP VSFVDTRDIG EVAAAALTED GYAGQVLTIT GPDSLSHGEA VAMLSEASGR PLAYKPVEPE QAEANSRAAG VSERTIIAQR GLFQVIRDGG NAPVTDVVQR VTGHAPRSFA QYAAEHADLW RDATNSTN
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