Gene Caci_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2493 
Symbol 
ID8333842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2819081 
End bp2819947 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content72% 
IMG OID644955646 
ProductNmrA family protein 
Protein accessionYP_003113252 
Protein GI256391688 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCC TCGTGATCGG CGCGACCGGC AAGACCGGCC GACCCGTGGT GGACGCCCTC 
GCCGCACGCG GTGCGAAGGT CGCCGCCGCC AGCCGCAATC CCGAAGCCGG ACGCGAACTC
CCCGACGGCG TCACGCCGGT CCGCTTCGAC TGGGCCGACC GCACCACCTG GACCTCGGCC
CTGGAGGGCG CCGAAGCCCT CTACATCGTC GGTCCCTACG CCCACCCCAC CGGCGAGCGC
CTTGTCGCCG ACCTGCTCGC CGAAGCCCAC GACACCCACC GCGTCGTCCT GCTGTCGGTG
ATCGGCGCCG AGCTGCTGCC GGTCGAGGCG ATGATGGCGC ACTGGGAGCG CGCCGTCCGC
GCCTCCGGCA AGGAGTGGAC CATCCTGCAC CCGAACTGGT TCTTCCAGAA CTTCGGTACC
GGATTCCTCC CCTCCCTGCG TGATCGCGGC GTCCTGCAAC TCCCCGCCGG CGACGCCCCA
GTGAGCTTCG TCGACACCCG CGACATCGGC GAGGTCGCCG CCGCGGCGCT GACCGAGGAC
GGCTACGCCG GCCAGGTGCT CACCATCACC GGACCCGACA GCCTGTCCCA CGGCGAAGCC
GTCGCGATGC TGAGCGAAGC CTCCGGCCGT CCCCTGGCCT ACAAGCCCGT CGAGCCTGAG
CAGGCGGAGG CGAACTCCCG CGCGGCAGGC GTGAGCGAGC GCACCATCAT CGCCCAGCGC
GGTCTGTTCC AGGTCATCCG CGACGGCGGG AACGCCCCGG TGACCGACGT CGTCCAGCGC
GTCACCGGCC ACGCGCCGCG CAGCTTCGCG CAGTACGCCG CCGAGCACGC CGACCTCTGG
CGCGACGCCA CGAACTCAAC GAACTAG
 
Protein sequence
MAILVIGATG KTGRPVVDAL AARGAKVAAA SRNPEAGREL PDGVTPVRFD WADRTTWTSA 
LEGAEALYIV GPYAHPTGER LVADLLAEAH DTHRVVLLSV IGAELLPVEA MMAHWERAVR
ASGKEWTILH PNWFFQNFGT GFLPSLRDRG VLQLPAGDAP VSFVDTRDIG EVAAAALTED
GYAGQVLTIT GPDSLSHGEA VAMLSEASGR PLAYKPVEPE QAEANSRAAG VSERTIIAQR
GLFQVIRDGG NAPVTDVVQR VTGHAPRSFA QYAAEHADLW RDATNSTN