| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2492 |
|---|
| Symbol | |
|---|
| ID | 8333841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2817970 |
|---|
| End bp | 2818938 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644955645 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003113251 |
|---|
| Protein GI | 256391687 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTAC TCACCGACGC CCTCACCGCG ATGCGCTCCG GACAGACGCG CTCGGCGCGG
ACCGAGGTGC GCGCGCCGTG GGGCTTGCGG TTCGGGGCGA TCGGCGGGAC GGCGTTCCAC
GTGCTGCTGC GCGGCCGGTG CTGGCTGCTG CCGCCGAGCG GGGAGCCGGT GGAGATGGCG
GTCGGGGAGG TGACGCTGGT GCGGCACGGG AACTCGGTCG CGCTCGCCGA CGACCCGGCG
ACGCCGCTGC AGGACTTCCG GCCGGCGGGC TGGCGCCCGG GGCAGACGAT CGGGCGGGTG
GACGTCGAGG GCAGCGGGGA GCGCTCGCTG CTGCTGTGCG GGGCGTATCA GCTGGGACGA
ACGCGGCCGC ATCCGCTGCT GGCGGAACTA CCGGATCTGC TGCTCCTGCG CGCCGACGAG
ACGCCGGGCC TGGCCGCCAC GGTCACGCTG CTCGGCGCGG AGCTGGAGCA CGCGCAGCCG
GGACAGGACG GCGTGGTACC GGCGCTGGTC GACGCGCTGC TCCTGCTGAT CCTGCGCGGC
TGGATCGAGC GCTCGGCCCG CGCCGACCCC GCACGCACGG ACACCGCAGG CACGGACACC
GCACGCACCA TCACAGCGCT GGGCTGGCCG GGCGCACTGA CCGACCCCGC GATCAGCAGC
GCCCTGACAG ACCTGCACGA CGACCCGGGC CGCGCCTGGA CCGTCGCAGA ACTCGGCGAC
CGCGCGGGTC TGAGTCGCTC GGCGTTCGCG CAACGGTTCA CGGCCCTGGT CGGTGAGCCG
CCGCTGACTT ACCTGACCTG GTGGCGCATG ACGATCGCCG GCCGCATGCT GCGCGAATCC
GACGCACCGC TGAGTACTGT GGCGCAGCGC GTCGGATACG CCTCGGAGTT CGCCTTCGCG
AAAGCGTTCA AGCGCGAGTT CGGGATCGCG CCGGGGCGGT ATCGGCGGGA GGTCGCGGAG
GCGGCTTAG
|
|---|
| Protein sequence | MDVLTDALTA MRSGQTRSAR TEVRAPWGLR FGAIGGTAFH VLLRGRCWLL PPSGEPVEMA
VGEVTLVRHG NSVALADDPA TPLQDFRPAG WRPGQTIGRV DVEGSGERSL LLCGAYQLGR
TRPHPLLAEL PDLLLLRADE TPGLAATVTL LGAELEHAQP GQDGVVPALV DALLLLILRG
WIERSARADP ARTDTAGTDT ARTITALGWP GALTDPAISS ALTDLHDDPG RAWTVAELGD
RAGLSRSAFA QRFTALVGEP PLTYLTWWRM TIAGRMLRES DAPLSTVAQR VGYASEFAFA
KAFKREFGIA PGRYRREVAE AA
|
|---|
| |