Gene Caci_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2344 
Symbol 
ID8333693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2660135 
End bp2661202 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content71% 
IMG OID644955497 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_003113103 
Protein GI256391539 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG AGAGCGTCAA CGAGAAGCTC GTCAGCTTCG GCTACGGCGC GGCTTGGACG 
GCGGTGAAGC TGCTGCCGGA GCGCGCGGCG TACCGGGTGT TCGACCTCAT CGCCGACCGG
CTGTGGGCCC GGCGCGGCGG CGCGGTACGG CAGCTGGAGA AGAACCTGCT GCGCGTGCTC
GGCAAGGACA CGTCGGAGAA GCAGCTGCGG GAGGTGTCGC GCAAGGCGAT GCGCTCGGCG
CTGCGGCAGT ACTGCGAGCA GTTCCGGGTC CCGACCTGGA GCCGCGAGCG GATCATGGAC
AGCGTCGACT TCCCCGCCGA GGACATAGGG CGGCTGAAGG AGGCCCTGGG CTCCGGGCGC
GGCGTGATCA TGGCGCTGGG GCACACCGGC AACTACGACC ACGCCGGGGT CTGGCTGGTG
AACTTCATGG GCGAGGGCTT CACCACCGTC GCCGAGCACC TCAAGCCGGA GTCGGTCGGC
GAGAAGTTCC TGGACTACCG GCGCGGCCTG GGCATGGAGG TGCTGCCGCA CGACGGCGGA
CCGTCGGTGT TCGGCACGCT GGCCCGCCGG CTGCGGGCCG GCAAGGCGGT CGCGCTGGTC
GCCGACCGCG ACCTGAGCGC CAGCGGCGCG CAGGTGACGA TGTTCGGCGA GGCCACGCGG
ATCGCGGCGG GTCCGGCGGC GCTCGCGGTG CAGACCGGTG CGGCGCTGCT GCCGGTGCAG
CTGTGGTACC CGTCGTACGG TCGGATGAGC ATAAGGGTGC GTCCTGAGAT CCCGGTCCCG
GCCGAGGGCA AGCGGCCGGA GAAGGTCGCC GTGATGTGCC AGCAGCTCGC CGACAACTAC
GCCGCGGGGA TCGCGGCGCA TCCGGCCGAC TGGCACATGA TGCAGAAGTT CTTCCTCGCT
GATTTGGATC CGGCTAAGGC GCCGAAGGCT GCTGCGGCTG CCAAGCCTGC TGAGGCGGCT
GGGGCTGAGG CCGCGACTGC GACTGCGACT GCCAAGCCTG CCGAGCCCGC CATGCCCGCC
GCGCCGGAAG CACCCGAGTC GACCGACGTG CCGCAGGAGG CGTCGTGA
 
Protein sequence
MKAESVNEKL VSFGYGAAWT AVKLLPERAA YRVFDLIADR LWARRGGAVR QLEKNLLRVL 
GKDTSEKQLR EVSRKAMRSA LRQYCEQFRV PTWSRERIMD SVDFPAEDIG RLKEALGSGR
GVIMALGHTG NYDHAGVWLV NFMGEGFTTV AEHLKPESVG EKFLDYRRGL GMEVLPHDGG
PSVFGTLARR LRAGKAVALV ADRDLSASGA QVTMFGEATR IAAGPAALAV QTGAALLPVQ
LWYPSYGRMS IRVRPEIPVP AEGKRPEKVA VMCQQLADNY AAGIAAHPAD WHMMQKFFLA
DLDPAKAPKA AAAAKPAEAA GAEAATATAT AKPAEPAMPA APEAPESTDV PQEAS