| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2306 |
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| Symbol | |
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| ID | 8333655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2611388 |
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| End bp | 2613133 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644955459 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003113065 |
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| Protein GI | 256391501 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.434674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGA CACAAGCTTC CAGCGCGACT GGGAAGGCCG TCCGCGGGCC CGACCATCCG
CACTACAAGT GGGTGGCGCT GTCCAACACC ACGTTGGGCA TGCTGATCGC GACGATCAAC
TCCTCCATCG TGTTGATCTC GCTGCCGGCG ATCTTCAACG GCATCAAGCT CGACCCGCTG
CAGCCCTCCA ACGTCAGCTA CCTGCTGTGG ATGCTGATGG GCTACATGCT GGTCACCGCG
GTGTTCGTGG TGGCGCTGGG GCGGCTCGGG GACATGTTCG GGCGCGTCAA GATCTACAAC
TCCGGGTTCC TGGTCTTCAC CGTCTGCTCG ATCGCGCTGT CGCTGGACCC GTTCCACGGC
GCGATGGGCG CGATGTGGCT GATCGGGTGG CGCGTGTTCC AGGCCATCGG CGGCGCCATG
CTGATGGCGA ACTCCGCGGC GATCATCACC GACGCCTTCC CGGCCGCGCA GCGCGGCATG
GCGCTGGGCA TCAACATCGT CGCGGCGATC GCCGGGTCGT TCATCGGGCT GGTGCTCGGC
GGCGCGCTGT CCGAATGGAA CTGGCGCACC GTGTTCTGGG TGAACGTGCC CATCGGGTTG
ATCGGCACGG TGTGGGCCTA CAAGTCGCTG CACGACACCG GGATCAGACA GAAGGCGCGC
ATCGACTGGT GGGGCAACCT CACCTTCGCC GCCGGCCTGA CCTCGCTGCT CGCCGGCATC
ACCTACGGCA TCCAGCCCTA CGGCGGGCAC ACGCAGGGAT GGACGAACCC CTGGGTCGAC
GCCGGGCTGA TCGGCGGCAT CGTCCTGATC GTCGTCTTCT GCGTGATCGA GGCGAAGATC
TCCGATCCCA TGCTGCCGAT GACGCTGTTC AAGAACCGCG ACTTCAGCAC CGGCAACCTC
GCCAACCTGC TCGGCGCCAT CGCCCGCGGC GGCTTGCAGT TCATGCTGAT CATCTGGCTG
CAGGGCATCT GGCTGCCGCT GCACGGCTAC GACTACAAGG ACACGCCGCT GTGGGCGGGC
ATCTACATGA TCCCGCTGAC CCTCGGCTTC CTCGCGGCCG GACCGATCGC CGGGCACCTG
TCCGACAAGT TCGGGCCGCG GGTGTTCGCC TCCGGCGGTC TGCTGGCGAT GGCGGCGTCG
TTCGCGGGCT TGCTCCTGAT ACCCACGAAC TTCTCCTACT GGGTGTTCGC GCTGCTCATC
TTCCTCAATG GCGTCGGCGG CGGGTTGTTC TCCGCGCCCA ACACGTCGCT GATCATGTCC
AGCGTCCCGA CACGCATGCG CGGTGCCGCC TCCGGTGCGC GCGCCACGTT CATGAACGCC
GGCATGGTGC TGTCGATGGG CATCTTCTTC TCGCTCATGG TCGCCGGGCT CTCCAGCTCG
CTGCCGCACA CCTTGTCCAC CGGGCTGGCC GCGCAGGGGG TGCCCGCCGG GACCGCGACG
CAGATCTCGC ATCTGCCGCC GGTGGCGACG CTGTTCGCCG CGTTCCTCGG CTACAACCCG
ATGCAGCAGC TGCTCGGTCC CTCGACGCTG CACGCGCTGC CGGCCTCCAA CGCCCAGACG
TTGACCGGCC GGGAGTTCTT CCCGCACCTG ATCTCAGGTC CCTTCCACGA CGGCCTCATG
GTCGTGTTCT GCCTCGCCAT CGCGATGGCG GTGATCGGCG CGGTGGCCTC GGCGCTGCCC
GGCGCGAAGA CCACGCCGGA GCAGGAGGAG ACGGCCGCCG GACAGAGCGC GGCGGCGACC
GCCTGA
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| Protein sequence | MTATQASSAT GKAVRGPDHP HYKWVALSNT TLGMLIATIN SSIVLISLPA IFNGIKLDPL
QPSNVSYLLW MLMGYMLVTA VFVVALGRLG DMFGRVKIYN SGFLVFTVCS IALSLDPFHG
AMGAMWLIGW RVFQAIGGAM LMANSAAIIT DAFPAAQRGM ALGINIVAAI AGSFIGLVLG
GALSEWNWRT VFWVNVPIGL IGTVWAYKSL HDTGIRQKAR IDWWGNLTFA AGLTSLLAGI
TYGIQPYGGH TQGWTNPWVD AGLIGGIVLI VVFCVIEAKI SDPMLPMTLF KNRDFSTGNL
ANLLGAIARG GLQFMLIIWL QGIWLPLHGY DYKDTPLWAG IYMIPLTLGF LAAGPIAGHL
SDKFGPRVFA SGGLLAMAAS FAGLLLIPTN FSYWVFALLI FLNGVGGGLF SAPNTSLIMS
SVPTRMRGAA SGARATFMNA GMVLSMGIFF SLMVAGLSSS LPHTLSTGLA AQGVPAGTAT
QISHLPPVAT LFAAFLGYNP MQQLLGPSTL HALPASNAQT LTGREFFPHL ISGPFHDGLM
VVFCLAIAMA VIGAVASALP GAKTTPEQEE TAAGQSAAAT A
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