| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2240 |
|---|
| Symbol | |
|---|
| ID | 8333589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2541495 |
|---|
| End bp | 2541965 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644955393 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_003112999 |
|---|
| Protein GI | 256391435 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.443887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0000267692 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATC TCGAAGCCGG CGGCACCGAG CCGCCGCTGC ACGTGTTCCG CACCCGCGTC
TGGTTCGACG AGCTGGACAA GGTCGGCGTC TTACATAACG CCCGCTATGC GGTCCACGCC
GAGCGCGCTC TGAGCACCTG GTACGAGAGC CGTCCGGAGC TGATCGACGG TCCGGACATG
CGGCACCTGG TGAAGGCCTA CGAGGTCGAG TTCCGCGTCC CGGTCGCGCA GGTCGGCGAG
CTGGACGTGG AGCTGCGGGT GGTGAAGATC GGGACGACGA GCTGCGTCTA CGAGTTCCGC
TTCGTGGGCG AGGGCGGCGT GGTGCACGCG ACCGGGCGGC GGACCATCGT GCGGACCGGC
CCGGACCGGC GGCCGACGCC GTGGTCGGAG GAGTTCCGGC GGATTCACGA ACGCGGCGTG
GGGGATGTCG GGGACGTGGC GGACGTGGCG GACGCGGCGG ACGCCGAGTA G
|
|---|
| Protein sequence | MNDLEAGGTE PPLHVFRTRV WFDELDKVGV LHNARYAVHA ERALSTWYES RPELIDGPDM
RHLVKAYEVE FRVPVAQVGE LDVELRVVKI GTTSCVYEFR FVGEGGVVHA TGRRTIVRTG
PDRRPTPWSE EFRRIHERGV GDVGDVADVA DAADAE
|
|---|
| |