Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2226 |
Symbol | |
ID | 8333575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2526552 |
End bp | 2527712 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644955380 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003112986 |
Protein GI | 256391422 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.190658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000495631 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTTCG TGGAGCCCGA GGAGCGCCTG GCGCTCCGCC AGGCGGTGCG CGACCTGGCC AAGCGGTACG GACCGGACTA CGTGCGCAAG CAGGCCAAGG CCGGCCTGAA GTCGACCGAG CTGTGGGCCG AGGTGGGCCG GGCCGGCTAC CTGGGCGTGA GCCTGCCGGT GGAGTACGGC GGCGGGGGCG GCGGCATCGC CGACCTGGCG GCGGTCGGCG AGGAACTTGC CCGGGCCGGC TGCCCGCTGC TGCTGATCGT GGTCTCCCCC GCCATCTGCG GCACCATCAT CGGCCGCTTC GGCACCGAGG AACAGAAGCA GAAGTGGCTC CCGGGCATCT CCGACGGCTC CTTCAAGATG GCCTTCGGCA TCACCGAGCC CGACGCCGGC TCCAACTCCC ACAAGATCAC CAGCACGGTG CGCCGCGATG GCGACGAGTG GGTTCTTTCC GGTCAGAAGG TCTTCATCTC CGGCGTCGAC GAGTCGGACG CGGTCCTGGT GGTGTCCCGC ACTAAGGACG CGGCCACCGG CGACCTGAAG CCGGCGCTCA TGGTGGTCCC CACTGACGCG CCGGGCTTCA CCAAGACCAT GATCGAGATG GAGATCGCCG GCCCGGAGAA GCAGTTCCAG CTCTTCTTCG ACGACGTCCG TCTCCCGGCC GACGCGCTGA TCGGGGACGA GGACGCCGGG CTGCTCCAGC TGTTCGCGGG CCTGAACCCC GAGCGCATCA TGGCCGCCGC CTTCGCCATC GGCACCGCGA AGTACGCCCT GGACAAGGCC GCCGAGTACG CCAAGACCCG GACGGTCTGG CGCGACCGCC CCATCGGCAC CCACCAGGGC GTCGCGCATC CCCTCGCCCA GGCCGCGATC CACGTCGAGC TGGCCAAGGT GATGACGCAG AAGGCTGCCT GGCTCTACGA CAACGGCGAC GACTTCGGCG CCGGCGAAGC CGCGAACATG GCCAAGTTCG CCGCCGCCGA CGCCGCGGTG GAGGCCGTCG ACCAGGCGAT CCAGACACAC GGCGGCAACG GCCTGGCGAC CGAGTACGGC TTGGCGCCGC TGCTCGCGGC GACCCGCGTG ACGCGGATCG CGCCGGTCAG CCGGGAGATG ATCCTGAACT TCGTCGCGCA GCACACGCTG GGGCTTCCGA AGTCGTACTA G
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Protein sequence | MSFVEPEERL ALRQAVRDLA KRYGPDYVRK QAKAGLKSTE LWAEVGRAGY LGVSLPVEYG GGGGGIADLA AVGEELARAG CPLLLIVVSP AICGTIIGRF GTEEQKQKWL PGISDGSFKM AFGITEPDAG SNSHKITSTV RRDGDEWVLS GQKVFISGVD ESDAVLVVSR TKDAATGDLK PALMVVPTDA PGFTKTMIEM EIAGPEKQFQ LFFDDVRLPA DALIGDEDAG LLQLFAGLNP ERIMAAAFAI GTAKYALDKA AEYAKTRTVW RDRPIGTHQG VAHPLAQAAI HVELAKVMTQ KAAWLYDNGD DFGAGEAANM AKFAAADAAV EAVDQAIQTH GGNGLATEYG LAPLLAATRV TRIAPVSREM ILNFVAQHTL GLPKSY
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