| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2155 |
|---|
| Symbol | |
|---|
| ID | 8333500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2442663 |
|---|
| End bp | 2443370 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644955305 |
|---|
| Product | Haloacid dehalogenase domain protein hydrolase |
|---|
| Protein accession | YP_003112915 |
|---|
| Protein GI | 256391351 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCC CGGGCAAGTC ACGCACCATC GAGGCGGTCG TCTTCGACGT CGGGGAGACG
CTCGTGGACG AGAGCATCGA GTACCACAAC TGGGCCGACT GGCTGGGCGT GCCCCGGCAC
ACGTTCTCGG CCGTGTTCGG AGCGGTCGTC TCGGCCGGCC GCTCGCATCT GGAGGCCTTC
GAGTACTTCC GGCCTGGCTT CGATCTGGAA GCCGAGCGCC GGGCCCGCAT CGTCGCGGGT
CGTCCTGAGG GCTACGGGGA GCGCGATCTG TATCCGGACG CGCGCCCCAC CCTGGCTGCT
TTGAAGGACG CCGGCTATCT GGTCCTGATA GCCGCGAACC AGACGACGGC CTCGCACCGC
ATCCTGGAAT CGCTCGACCT GCCGGTGCAC CTGGTGACCA CCTCCGGCAT GTGGGGCGGT
CTGGAGAAAC CTGATCCGGC GTTCTTCGCC AAGGTCGTCG AGGTCTGCGA CGAGGTCTCG
CGGGGGCAGG GCCGCGGCCC GCTGCCCGGC GCCGGCAGCG TCCTGTACGT CGGGGACCGG
CTCGACAACG ATCTGCGTCC CGCCTGGGGC GCCGGTCTGC GGACCGCGTT CATCCGGCGC
GGCCCTTGGG GCATGGTGCA CGGCGACCAC CCGGATCTGG TGGCCAAGAC CGACTTCTAC
CTGACCGCCC TGGACCAACT TCCGGGGCTG CTCGCCGACG AGGTCTGA
|
|---|
| Protein sequence | MHIPGKSRTI EAVVFDVGET LVDESIEYHN WADWLGVPRH TFSAVFGAVV SAGRSHLEAF
EYFRPGFDLE AERRARIVAG RPEGYGERDL YPDARPTLAA LKDAGYLVLI AANQTTASHR
ILESLDLPVH LVTTSGMWGG LEKPDPAFFA KVVEVCDEVS RGQGRGPLPG AGSVLYVGDR
LDNDLRPAWG AGLRTAFIRR GPWGMVHGDH PDLVAKTDFY LTALDQLPGL LADEV
|
|---|
| |