Gene Caci_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2113 
Symbol 
ID8333458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2398447 
End bp2399361 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content73% 
IMG OID644955263 
ProductPfkB domain protein 
Protein accessionYP_003112873 
Protein GI256391309 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGCGT TGTCGCAGCA TGCTGAGGCC GGGCTCGAGG TCGACGTGCT GGTGGTCGGC 
GGCGCGGGGA TCGACACGAT CGTCCGCGTC CCGGAGCTGC CGGTGCCGTA CGCGGATTCG
GTCCTGGTGG ACCCGATCGA GTCCTACGTC GCGCACACCG GCACGGCGGT CGCCCTCGGC
ACGCGCGCGC TGGGACTGCG GGTGAAGTTC GTCGACTTCC TCGGCGAGGA CACCTTCGGC
GAGCTCGTCC TGCGCCGCTT CGCCGAGGAG AAGCTGGACT TCGCCTGGTT CCCCTCGGCC
GCCGGCACGA CCCGCGCGGT GAACCTGGTG TCGGCCGACG GACGCCGGAT GTCGTTCTAC
GACCCGCGCG GCGTGCCGGG GCAGCAACTG CCTGAGGCGT TCTACGAGGA CTGGCTTACG
CGGACGCGGC ACGTGCACGT CTGCATAGCC GACCACGCGC GGCACGTGCT GCCGGCGGCG
CTCCGGCACG GCGTCCCGAT CTCCACCGAC CTGCACGACT GGGACGGCGT CTCCGAGCAC
CACCACGACT TCGCCCACGC CGCGGACCAC GTGTTCATGA GCGCCGCGAA CCTCGGCGAG
CGACGCGACG CGGTACTCGC CGAGGTCCTG GCGCGCGGTC GGGCGAAGAC GGTCGTGGCC
ACGGACGGCG CGCGCGGGGC GTACTTGGCG GTCCGCGACG TCCCGGGCGT CCGCCACTTC
CCGGCCCTGA CGCCGCCGGC GCCGGTGGTG GACAGCAACG GCGCCGGGGA CGCTTTCGTG
ACCGGGTTCA TGTCGGGGGT GCTGCGCGGC GCGGCGGTCG AGGAGTGCAT GCGCCGGGGG
CTGGCGTGCG GGGCTTATGC CTGCACGGTG CACGGGACAG CGGAGCGGTT CGCAGCCGAG
AGCGATCTGA GCTGA
 
Protein sequence
MGALSQHAEA GLEVDVLVVG GAGIDTIVRV PELPVPYADS VLVDPIESYV AHTGTAVALG 
TRALGLRVKF VDFLGEDTFG ELVLRRFAEE KLDFAWFPSA AGTTRAVNLV SADGRRMSFY
DPRGVPGQQL PEAFYEDWLT RTRHVHVCIA DHARHVLPAA LRHGVPISTD LHDWDGVSEH
HHDFAHAADH VFMSAANLGE RRDAVLAEVL ARGRAKTVVA TDGARGAYLA VRDVPGVRHF
PALTPPAPVV DSNGAGDAFV TGFMSGVLRG AAVEECMRRG LACGAYACTV HGTAERFAAE
SDLS