| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2112 |
|---|
| Symbol | |
|---|
| ID | 8333457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2397334 |
|---|
| End bp | 2398386 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644955262 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003112872 |
|---|
| Protein GI | 256391308 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCCA TGACCGACAA CGCCTCATTG CCTTCCACCG CACGACTCGC GGACATCGCG
GCGCAAGCCA AGGTCAGCGA GGCGACGGTG AGCCGGGTGC TGAACGGGAA ACCGGGGGTG
GCCGCCGCCA CCCGGCAGGC GGTGCTGGCG GCGCTGGACG TCATGGGCTA CGAGCGGCCC
ACCCGGTTGC GGCAGCGGAC CGCGGCGCTG ATCGGGCTGA TCATTCCGGA GTTGGACAAC
CCCATCTTCC CGGCGATGGC GCAGGCGGTG GAGCGGGCGC TGACCCACCA CGGCTACACC
CCGGTGCTGG CCACGGTCTC GCCGGGCGGC GCGACCGAGG ACGACCTCGT GGAGCTCCTG
ATCGAGCACG GGGTCGCCGG GATCGTCTTC GCCTCCGGGC TGCACGCCGA CACCACCGCC
TCGCGCGACC GGTACCACCG GCTCTCGGAC CGCGGCGTGC CCTTCGTCCT GATCAACGGG
TTCGCCGAGG GCATCGCGGC GCCGTTCATC TCCCCGGACG ACGCCCTGGC GGCGCGCCTG
TCGGTGAACC ACCTGGCCGA CCTGGGGCAC GAGCGCATCG GGCTGGCGGT CGGACCGAAG
CGGTACGTGC CGGTGATCCG CAAGATCGAG GGATTCACCG CCGCGCTGCG CGACACGCTC
GGCGTGGAGA ACCCGGCGGA CTTCGTCGAG TACTCGCTGT ACGGCTTCGA AGGCGGCCGC
GCGGCGGCGG CGAAGCTGCT GGACAAGGGC TGCACCGGCA TCGTGTGCGC CTCGGACATG
ATGGCGCTCG GCGCCATCGC CGAGGTGCGC GCCCGGGGCA TGGCGGTGCC GGGGGACATC
TCGGTGGTCG GCTACGACGA CTCGCCGCTG ATCCCCTACA CCGACCCGCC GCTGACCACG
GTGCGCCAGC CGGTCGCCGC CATGGGCGCC GCCGCGGTGC GCGCGCTGCT GGAGGAGGTC
GGGGGCGGGC ACGCGCCGCA CACCGAGTTC GTGTTCGCGC CGGAGCTCGT CGTGCGGGGG
TCGACGGGGT CCGGGCCGCG CGTGCGGCGA TAG
|
|---|
| Protein sequence | MGAMTDNASL PSTARLADIA AQAKVSEATV SRVLNGKPGV AAATRQAVLA ALDVMGYERP
TRLRQRTAAL IGLIIPELDN PIFPAMAQAV ERALTHHGYT PVLATVSPGG ATEDDLVELL
IEHGVAGIVF ASGLHADTTA SRDRYHRLSD RGVPFVLING FAEGIAAPFI SPDDALAARL
SVNHLADLGH ERIGLAVGPK RYVPVIRKIE GFTAALRDTL GVENPADFVE YSLYGFEGGR
AAAAKLLDKG CTGIVCASDM MALGAIAEVR ARGMAVPGDI SVVGYDDSPL IPYTDPPLTT
VRQPVAAMGA AAVRALLEEV GGGHAPHTEF VFAPELVVRG STGSGPRVRR
|
|---|
| |