Gene Caci_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2106 
Symbol 
ID8333451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2389782 
End bp2390840 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content74% 
IMG OID644955256 
ProductMethyltransferase type 12 
Protein accessionYP_003112866 
Protein GI256391302 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.139734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGG CGCTGCGCGG CGGCAACCCA TTGGAGCGTG CTGCCCTGCG CGCCAACCTA 
GTCCCGACTC CCGCCGCCGA GGCATGGGGT GGCGTTGCGG CCTCTGGCGT GTTGGTGGCG
GCGGTGCGGA CCGGCGTGAT CGCGCGCCTG GCGAGCGCTC CGGGCACGCC GGAGGAGATC
GCCCGCGACC TGTGCCTGGC GCCGGCGCCG ACCCGGCTGC TGCTGGACTG CCTGATCTCC
ACCGGGCACG CGCGCCGCTC CCGGGACGGC TCGGTGCGCC TGGCCCGGCG CGACCGGCGC
TGGCTGGACC CGGAGTCCGA GGTGGGCGTC GCACGGTTCG TGAACGCCTG CGGCGACTAC
TTCGACTGGT GGCGGGATCT GGACCGGGTG ATAGAGACCG GCGCTTCGGT GGAGCACCAC
GATCACGGTC CGGACGACCC GTACTGGCGC CGCTATGTGC TGGGGCAGCT GGACCTGGCT
CGGCTGTCCG CGGCGGAGGT GGCGCGGCGG CTGGTGCTGC CGCGCGACGC CGGCAGCGTG
CTGGACGTCG GCGGCGGGCA CGGCTGGTAC TCCGCGACGC TGTGCCGGCG CCATCCCGGG
CTCACGGCGA CGGTGCTGGA TCTGCCGGGC AGCGCGCGGG TCGGGCGCGA GGTGATCGAG
GCCGCCGGGT TGGCGCATCG GGTGACGTTT GTCGAGGGCG ATGCGCGCAC CGCCGAGTTC
CCCGGCGGCC AGGATGCCGT GCTGTTGTTC AACCTTCTGC ACCACCTCGC CGAGGGGGAG
ATCCCGGCGC TGTTCGCGCG CGCCGCCGAG GCGCTGAAGC CCGGCGGCAC GGTGGTCGTC
CTGGACGGCT TCGCCGAGCC GCCGCGCCCG GGCCGGGCTC GGGGCAACGC CGCCGCGACA
CACCTGGCGC TGTTCGTCCG ACTGACTTCG GGCTCTACGG TGTACACGCC GGCGGACCTC
CGGAGCTGGC TGCACGGCGC CGGATTCGGC GATCCGCGGC GGGTGCGTTC GGCCCGGATC
CCGGGTTTGG CGCTTCACCA GGCCTGGAGG AGTTGGTGA
 
Protein sequence
MRLALRGGNP LERAALRANL VPTPAAEAWG GVAASGVLVA AVRTGVIARL ASAPGTPEEI 
ARDLCLAPAP TRLLLDCLIS TGHARRSRDG SVRLARRDRR WLDPESEVGV ARFVNACGDY
FDWWRDLDRV IETGASVEHH DHGPDDPYWR RYVLGQLDLA RLSAAEVARR LVLPRDAGSV
LDVGGGHGWY SATLCRRHPG LTATVLDLPG SARVGREVIE AAGLAHRVTF VEGDARTAEF
PGGQDAVLLF NLLHHLAEGE IPALFARAAE ALKPGGTVVV LDGFAEPPRP GRARGNAAAT
HLALFVRLTS GSTVYTPADL RSWLHGAGFG DPRRVRSARI PGLALHQAWR SW