Gene Caci_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2098 
Symbol 
ID8333442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2381560 
End bp2382615 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content68% 
IMG OID644955247 
Producthypothetical protein 
Protein accessionYP_003112858 
Protein GI256391294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.217218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACG TGGACACCAG GGCCGCCCAC ACCATCGACA CGCTGGACGA CCTGCGCCGC 
CACCTGCAGT GGGCGATCGA GCTGGAGCAC GCGACCATCC CGCCGTACAT GTGCGCGCTG
TACTCGCTGG ACCCCGAGCG AAATCCCGAG GCCGCGCAAG TGGTGAGCAC AGTGCTCACC
GAGGAGATGC TGCACCTGGC GCTCGCGGCG AACCTGCTCA ACGCAGTCGG CGGCACCCCG
AAGCTCGACG CCCCGCAACT GCTGCCGACC TACCCCCACC CGCTCCCGCA CAGCGACGGA
TCCGTCCAGA TCCACCTGGT CCCCTTCGGT CCCGAAGCCC TCGACCTGTT CCTGCAGATC
GAGCAGCCGG CCACGGCAGA CGCGCCACCG CAATCCGACC GGTACCGAAC GATCGGCCAG
TTCTACGCCG CCATCGAAGC CGGCCTGCGC ACCCTGTGCG AGGAACTGAC CGAGGAAGCC
GTCTTCCACG GCGACCCCCG CCGCCAACTC GGCGACATGC ACCTGCCCGG CGGAGGCGGC
CAGGTCATCC CCGTCCACGA CCTGAAGTCT GCCCTCGCCG CCCTCGCCGA GATCATCGAG
CAGGGCGAAG GAGCGGCCCG CACCGACGTC TGGGACGGCG ACGTCGACGT CTTCCACCCC
GACCGCGACG AGGTAGCGCA CTACTACCGC TTCCACGAAC TCCGCACCGG CCGCCGCTAC
CAACGCGGCG ATACCCCCCA GTCCGGTCCC ACCGGCGACC CGATCACCGT GGACTTCGAC
GCGGTCCTCC CGATGCGCCG CGACGCCTGC ACCACCGACC ATCCGGAAGA CAGCCCGATC
CGCAAGGCGC AGCAGGAATT CGACCAGACC TACTGCCTCC TCCTCTACTT GCTGGAACAG
GCCTTCAACG GAGACCCGAG CCAACTCAAG GACTCCGTCG GAGTGATGTA TCAGCTTCGA
GCCCAGGCAC TGAAGCTCAT GAAGATGCCC GACGGCGACG ACGGGACCAC CGCCGGTCTG
ACCTTCGAGT ACGTGCTGCC GGAGCTGCGC AGCTGA
 
Protein sequence
MDYVDTRAAH TIDTLDDLRR HLQWAIELEH ATIPPYMCAL YSLDPERNPE AAQVVSTVLT 
EEMLHLALAA NLLNAVGGTP KLDAPQLLPT YPHPLPHSDG SVQIHLVPFG PEALDLFLQI
EQPATADAPP QSDRYRTIGQ FYAAIEAGLR TLCEELTEEA VFHGDPRRQL GDMHLPGGGG
QVIPVHDLKS ALAALAEIIE QGEGAARTDV WDGDVDVFHP DRDEVAHYYR FHELRTGRRY
QRGDTPQSGP TGDPITVDFD AVLPMRRDAC TTDHPEDSPI RKAQQEFDQT YCLLLYLLEQ
AFNGDPSQLK DSVGVMYQLR AQALKLMKMP DGDDGTTAGL TFEYVLPELR S