Gene Caci_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2025 
Symbol 
ID8333369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2292840 
End bp2293466 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID644955175 
ProductMethyltransferase type 12 
Protein accessionYP_003112786 
Protein GI256391222 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0356905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG TCGAGGGCCG CGGCATGTGG GAGCAGTACT ACGGCAAGTC CCAGTCCGTC 
TGGGGCTGGG CGCCGAACCG CTTCGTGGCC GAGGTCCTCG GCCCGCTACC GGCCGGCCGG
GCACTGGACC TGGCCGCCGG TGAGGGACGC AACGCGCTCT GGCTCGCCGG CCTCGGATGG
CGGTCCACCG CCGTCGACTT CGCCGAGAAC GCGCTGGAGC GCGGGCGTGC CCAGGCTGTG
GAGCACGGCC TGGAAGTGGA GTGGGTCCTC GCCGACGTGC TGGAGTACCA GCCCGAGCCC
GGCGCCTACG ACGCGGTCGT GATCGCCTAC CTCCATCTGG AAGCCGACCC GCGGACCGCC
GTGCTCCACA ACGCCGCAAA GGCGCTGGCG CCCGGCGGAA CGCTGGTCGT CGTCGGCCAC
GACGTCACCA ACATCGCCGA CGGCGTGGGC GGCCCGCAGA ACCCTGCCAT CTTGTACACG
CCCGAGCGCG TCACCGAAGC GCTGGAGCGC CTGGCCGATG TCGATATGAA GATCGTGCGC
GCCGAGCGTG TCCACCGACA GACGGACCGT GCGCCGCAGC CGGCCATCGA CACATTGGTC
GTAGCTCAGG CAACCCAAGC CTCATAG
 
Protein sequence
MTAVEGRGMW EQYYGKSQSV WGWAPNRFVA EVLGPLPAGR ALDLAAGEGR NALWLAGLGW 
RSTAVDFAEN ALERGRAQAV EHGLEVEWVL ADVLEYQPEP GAYDAVVIAY LHLEADPRTA
VLHNAAKALA PGGTLVVVGH DVTNIADGVG GPQNPAILYT PERVTEALER LADVDMKIVR
AERVHRQTDR APQPAIDTLV VAQATQAS