Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1995 |
Symbol | gabD2 |
ID | 8333338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2258711 |
End bp | 2260264 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644955144 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_003112756 |
Protein GI | 256391192 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTGC CGCCTTCGGT CACCTCTGAA CTGCTCGCGA AGCTCACCGG CATGGTGGTC TCCACCAGCG GTCGCGCCTA TCCGGTAACC GAGGTCTACA CCGGCGAGGA GGTCGTGGAC CTGCCGCAGT CCGACCCGGC CGACGTCCAG ACCGCTTATG CCGCGGCCCG AGCGGCCCAG GCGGTCTGGG CCTCCTGGCC GCTCAAGCGG CGGCTCGCGG TGATGAAGCG GTTCCACGCG CTGCTGTTGG AGCAGGGGCT GATCGTCGCC GATCTGATGC AGGTCGAGAC CGGCAAGGCG CGGCGGATGG CTTTCGAAGA GACCTGCGAC GTGCTCATGG TCACCAGCCA CTACATCAAG GCGGCGCCGC GGATCCTCAA GGAGCGCAAG CACGGCGGCG TGGTGCCGCT GATGTCCACC TCGACCGAGG TCCGGATTCC CAAAGGTGTC ATAGGGCTGA TATCGCCGTG GAACTTCCCC TTCGCGACCA GCCTGTCCGA TGCGATGCCC GCGCTGATCG CCGGCAACGG CGTGGTGCTG AAGCCGGACA ACAAATCCAC GCTCAACGTC GCCTATGGCG TCGGCTTGCT CTACGAAGCA GGCATGCCCG CAGGCCTCGT GCAGATCGTC TGCGGTGAGG GCCCTGATAT CGGCGCGGCG CTGATCGAGA ACGCCGACTA CGTCATGTTC ACCGGCTCGA CCGCGACCGG CCGGGTGATC GGCGCCCAAG CCGGGCAGCA GCTGATCGGC TGCACCCTCG AACTCGGCGG CAAGAACCCG TTGATCGTCC TGGACGACGC GAACCTCGAC GAGGTGATCG CCGGCACGGT GACCGCCACG TTCCTGAACA CCGGCCAGGC GTGCATGCAC ATCGAGCGCA TCTACGTCTC CGAGCGCCGC AAGGACGAGT TCACGCGGCG CTTCGTCGAA GCCGTCCAAG CGATCCGGGT CGCCGGAGCC TACGACTTCT CCCCCGACAT GGGCTCGCTG GTCTCGGTCC CGCAGCGGGA ACGCGTGCAG GCGCACGTCG AGGACGCCGT CGCGAAGGGC GCGACCGTGC TGACCGGCGG CAAGCCGCGC CCCGATCTGG GCCCGGCGTT CTTCGAGCCG ACCGTCCTGA CCGGCGTCAC CCCGGACATG GTGCTGGCCA GGACGGAGAC CTTCGGCCCG GTCACCGCGA TCTACCCGTA CACCTCGGTC GACGCGGCGG TGGCGATGGC CAACGACACC GAATACGGCC TGAACGCCAG TGTCTGGGGC GGCGACCGCC GCGCCGCCGA AGCCGTCGGC CGCCGCATCG AGGCCGGCAA CATCAACGTC AACGACGGGC TGGCCGCCTC CTACGCCTCG AAGAAGAGCA CCTCCGGCGG CTTCAAGGCC TCCGGCGTCG GCAGCCGCCA CGGCGACGCC GGCATGCTGA AGTACACCGA CGTGCAGAAC GTCGCCGTGC TCAAGAAGCA GGTGCTCACG AACCCGCCGG ACACCGACTG GACCAAGCAG GTCGACAAGA CGATCAAGGG TCTGCGATTC CTCCGCAAGC TGGGCATCCG CTGA
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Protein sequence | MSLPPSVTSE LLAKLTGMVV STSGRAYPVT EVYTGEEVVD LPQSDPADVQ TAYAAARAAQ AVWASWPLKR RLAVMKRFHA LLLEQGLIVA DLMQVETGKA RRMAFEETCD VLMVTSHYIK AAPRILKERK HGGVVPLMST STEVRIPKGV IGLISPWNFP FATSLSDAMP ALIAGNGVVL KPDNKSTLNV AYGVGLLYEA GMPAGLVQIV CGEGPDIGAA LIENADYVMF TGSTATGRVI GAQAGQQLIG CTLELGGKNP LIVLDDANLD EVIAGTVTAT FLNTGQACMH IERIYVSERR KDEFTRRFVE AVQAIRVAGA YDFSPDMGSL VSVPQRERVQ AHVEDAVAKG ATVLTGGKPR PDLGPAFFEP TVLTGVTPDM VLARTETFGP VTAIYPYTSV DAAVAMANDT EYGLNASVWG GDRRAAEAVG RRIEAGNINV NDGLAASYAS KKSTSGGFKA SGVGSRHGDA GMLKYTDVQN VAVLKKQVLT NPPDTDWTKQ VDKTIKGLRF LRKLGIR
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