| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1938 |
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| Symbol | |
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| ID | 8333281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2192038 |
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| End bp | 2193681 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644955087 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_003112699 |
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| Protein GI | 256391135 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.684685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTG AAGCGACCGT TGCCTCCGAA GTCGGCAAGA CCCTGCGCGA AGCAGGCGCC
GACGTGGTGT TCGGGGTTGT CGGCAGTGGC AACTTCCATG TCACCAATGC GTTGGTCGAT
GCCGGCGCGC GGTTCGTCGC GGCACGGCAC GAGGGTGGTG CCGCCACGAT GGCCGATGCC
TATGCGCGCG CCAGTGGTGG GCTCGGGGTG CTGTCCGTGC ATCAGGGCCC TGGTCTCACT
AATGCGATGA CCGGTATTGC TGAAGCTGCT AAGAGCCGCA CGCCGTTGGT TGTTTTGGCG
GCTGAGGCGA CATCTCGGCT GTCGAACTTC TGGGTTGACC AGAATGCTCT GGCACGGGCT
GTCGGTGCGT TGCCGCGGCG TGTGAACAGC GCCAGATCCG CGCGTGCCGA CACGCTGACG
GCTGTCGCGA CCGCGCAATC CGAGCGGCGG ACCGTGATTC TCAATCTGCC GCTGGATGTG
CAGCAGCAGC GGGTCGAGGC CGGGAAGCGG TTCGGCTTGC TGTCCGGCGC GACGACCGTG
CATCCCAGTG AGAACGACAT CTCTGCGCTT GCCGCGCTGC TGGAGGAAGC CGAACGGCCG
GTGTTCATCG CGGGGCGGGG CGCGCGGCTG GCCGACGCCG GGGAGGCGAT CGCCGCGTTG
GCCGAGCGTT CCGGCGCGCT GCTGGCGACC TCGGCGGCGG CGCGCGGGCT GTTTCGCGGC
GATCCGTTCG ACCTCGACGT CAGCGGAGGG TTCGCCACGC CGCTGGCCGC CGAGCTGATC
CGGTCCGCGG ACCTGATCGT CGGCTGGGGG TGCGGGCTGA ACATGTGGAC GTTGCGCCAC
GGCACGCTCA TCGCCCCCGA CGCCAAGGTG GCGCAGGTCG ACACCGAACA GGACGCGCTG
GGGCGGCACC GGCGCGTGGA CCTCGGCGTG GTCGGCGACG CGACGGACAC CGCACGCCAG
GTCGCCGACC GGGTGTCGGC CAAGCACGGC TACCGCTCGC GCGAGATCGC CGGCTCGGTG
CGAAGCGAGG GCCGCTGGCC GCAGATCCCG TTCGCCGACC GCTCCACCGC CGACCGCATC
GACCCCCGCA CGCTGTCCGC CGAACTCAAC ACCCTGCTTC CCACCGAGCG CACCGTCGCC
GTCGACTCCG GCAACTTCAT GGGCTACCCG GTGATGTACC TGGACGTCCC CGATGCCGAA
GGACTCGTGT TCACCCAGGC CTACCAGTCC ATCGGACTCG GCCTGGCGAC CGCGATCGGC
GCCGCCCTGG CCCGCCCGGA CCGCCTCACC ATCGCAGCCC TCGGCGACGG CGGCGCCCTG
ATGTCGGTCA CCGAACTGGA GACCGCCGTC CGCGAACAGC TGGGACTGCT CATCGTGGTC
TACAACGACG CGGCATACGG CGCCGAGGTC CACCACTTCG GCCCGAACGG CGACGACCTG
GCCACCGTGA CCTTTCCCGA CACCGACATC GCCGCCATCG CCCGCGGCTT CGGCTGCGAA
GCCGCAACCA TCCGCACCCC CGAAGACCTC AAGGTGATCG CACCCTGGCT CGCCGGCCCC
CGCGACCGCC CCCTGCTGCT CGACGCGAAG GTCGTCGCCG ACGAGGCCTC CTGGTGGCTG
GAGGAGGCCT TCCGCGGGCA CTGA
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| Protein sequence | MSVEATVASE VGKTLREAGA DVVFGVVGSG NFHVTNALVD AGARFVAARH EGGAATMADA
YARASGGLGV LSVHQGPGLT NAMTGIAEAA KSRTPLVVLA AEATSRLSNF WVDQNALARA
VGALPRRVNS ARSARADTLT AVATAQSERR TVILNLPLDV QQQRVEAGKR FGLLSGATTV
HPSENDISAL AALLEEAERP VFIAGRGARL ADAGEAIAAL AERSGALLAT SAAARGLFRG
DPFDLDVSGG FATPLAAELI RSADLIVGWG CGLNMWTLRH GTLIAPDAKV AQVDTEQDAL
GRHRRVDLGV VGDATDTARQ VADRVSAKHG YRSREIAGSV RSEGRWPQIP FADRSTADRI
DPRTLSAELN TLLPTERTVA VDSGNFMGYP VMYLDVPDAE GLVFTQAYQS IGLGLATAIG
AALARPDRLT IAALGDGGAL MSVTELETAV REQLGLLIVV YNDAAYGAEV HHFGPNGDDL
ATVTFPDTDI AAIARGFGCE AATIRTPEDL KVIAPWLAGP RDRPLLLDAK VVADEASWWL
EEAFRGH
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