| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1937 |
|---|
| Symbol | |
|---|
| ID | 8333280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2191011 |
|---|
| End bp | 2191784 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644955086 |
|---|
| Product | cyclase family protein |
|---|
| Protein accession | YP_003112698 |
|---|
| Protein GI | 256391134 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGC TGGTCCAGCT GGCTGAGGCG GTCGCCGCCG GGACGATCGA GGTCGTCGAT
CTCACCGCGC CGCTGTCGCA CGAGACACCG ATCCTGCACC TGCCCGAGCC CTTCAATAAC
ACGGTCCAGT TCTCGCTGCG CGAGATCAGC CGCTACGACG AGCGCGGTCC GGCCTGGTAC
TGGAACGACA TCGTCACCGG CGAGCACGTC GGGACGCACT TCGACGCGCC GGTGCACTGG
ATCACCGGAC GTGACGGCGA GGACGTCTCG CAGGTCGCGC CCCGGCGCCT GATCGGTCCG
GCGGTGGTGC TGGACGCCTC CGAGCGCGCC GCGCAGGATC CGGACCACCT GCTCCAGGTG
GAGGACGTGC GCGAGTGGGA GTCCAAGTAC GGTCCGCTGC CGGAGGGCGG CTGGCTGTTG
TATCGCACCG GATGGGACGC TCGTGCCGGT GACCAGGCGG CGTTCCTCAA CGCGAACGAG
ACCGGTCCGC ACAGCCCCGG GTTCTCGGTG GAGTGCGCGA AGTGGCTCGC GGAGGAGACG
CCGCTGCAGG GCATCGGGGT GGAGACCGTC GGTACCGATG CCGGCGCCGC TCACAGCTTC
GACCCGCCGT TCCCGTGCCA CTCCTCCATG CTCGGCGCCG GCAAGTACGG GCTGACGCAG
TTGCGGAACC TGGATCGGCT GCCGGCGCGG GGCGCCGTGC TGATCGCGGC GCCGTTGCCG
ATCGTGCGGG GGTCGGGGAG CCCGGCGCGG GTGCTGGCGC TGGTCGAGCA CTAG
|
|---|
| Protein sequence | MTLLVQLAEA VAAGTIEVVD LTAPLSHETP ILHLPEPFNN TVQFSLREIS RYDERGPAWY
WNDIVTGEHV GTHFDAPVHW ITGRDGEDVS QVAPRRLIGP AVVLDASERA AQDPDHLLQV
EDVREWESKY GPLPEGGWLL YRTGWDARAG DQAAFLNANE TGPHSPGFSV ECAKWLAEET
PLQGIGVETV GTDAGAAHSF DPPFPCHSSM LGAGKYGLTQ LRNLDRLPAR GAVLIAAPLP
IVRGSGSPAR VLALVEH
|
|---|
| |