Gene Caci_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1810 
Symbol 
ID8333153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2052957 
End bp2054285 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content72% 
IMG OID644954960 
ProductL-lysine 6-monooxygenase (NADPH) 
Protein accessionYP_003112572 
Protein GI256391008 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.633774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACT ACGACGTGGT CGGGGTCGGG ATCGGCCCGT TCAACCTGTC CTTGGCGGCG 
CTGGCCGAGC CCTTGCGGGA GAACCACAGC CTGCAGCCGC TGTTCCTGGA ACGGCAGCCG
GTGTTCGCCT GGCACCGCGG CATGATGCTC GACGGCGCCA CGCTCCAGGT CCCCTTCCTG
GCGGACCTGG TGTCGCTCAC CGATCCCACG AGCCGCTTCT CGGTGCTGAA CTGGCTGCGC
GAGACCGACC GCCTCTACAG CTTCTACTTC GCCGAGAACC TCTTCTTGCA GCGCCGCGAA
TACGAGGCCT ACTGCCAGTG GGTCGCCGCG CAGCTGCCGT TCTGCCGCTT CGGCACCGCG
GTCACCAAGA TCCGGCGCTC GGAGGCCGGA TTCGAGATCG AATACACCGC GCCGAGCGGA
CCGGTGCTGG TGTCGGCGGC GAACATCGTG CTGGGCATCG GGACCGAGCC GGTGATGCCG
TTCGAGGTCC CCGGCGCTCC GCCGCACGCC GCGCTGCACA GCGCGGACTA CATGGTGCAC
CGCGAGCGCC TGCGGACCCT GGACGACGTG ACCGTGATCG GCTCGGGGCA GTCCGGCGCC
GAGATCGTGC TGGACCTGCT GCGCTCCGGC GCCCCGGGGC AGCGGGTCCG CTGGCTGACG
CGCAGCGCGG CGTTCGAGCC GATGGAGTAC TCCAAACTCG GGCTGGAGCA CTTCACGCCG
GACTACACGC GCTTCTTCCA CGGCCTGCGC GAGGACGTGC GCGCCGACCT GCTGCGCGGC
CAGGGCCGGC TGCACAAGGC GATCAGCTTC GAGACCATCG CCGAGCTGCA CGCCGAGCTG
CACATGCGCT CCTTCGACAG CCTCTACGGC GGGACCCTCG GCCTGGCCGG GGACACCGGC
GCCACCCTGC TGCCCGGCGT GTCGGTGACC GGGGGAGCGT GGCGCCCCGG CGGTCCCGGC
GCGGTCGAGC TCACCTGCCT GCACGAGCGG CAGAAGCGGG AGTTCGGCGT CCTGACCGAC
GCCGTCGTCC TGGCCACCGG CTACCGCGAG CGGGTCCCGG GGTTCCTGGA CGCCGACCTG
GAGCAGCTGC TCGGCGCGGC CGATCTGGAC CACCGGATCG CCCCGGGGGT GTACGCGCAG
AACGCCGAGC GGCACACCCA CGGCGTCGGC GCCCCGGACC TGGGCCTGGG CGCCCACCGG
GCGGCCGTCA TCCTGAACGC GCTCACCGGC AGGACCGTCT ACGACCTGCC CCGGCGTGCC
GCGCACACCG CCTTCGACCC GGAGGCGGCC GCGGAGCGTG ATCCCGGAAT TCGAATCGAG
GTGCCCTGA
 
Protein sequence
MQHYDVVGVG IGPFNLSLAA LAEPLRENHS LQPLFLERQP VFAWHRGMML DGATLQVPFL 
ADLVSLTDPT SRFSVLNWLR ETDRLYSFYF AENLFLQRRE YEAYCQWVAA QLPFCRFGTA
VTKIRRSEAG FEIEYTAPSG PVLVSAANIV LGIGTEPVMP FEVPGAPPHA ALHSADYMVH
RERLRTLDDV TVIGSGQSGA EIVLDLLRSG APGQRVRWLT RSAAFEPMEY SKLGLEHFTP
DYTRFFHGLR EDVRADLLRG QGRLHKAISF ETIAELHAEL HMRSFDSLYG GTLGLAGDTG
ATLLPGVSVT GGAWRPGGPG AVELTCLHER QKREFGVLTD AVVLATGYRE RVPGFLDADL
EQLLGAADLD HRIAPGVYAQ NAERHTHGVG APDLGLGAHR AAVILNALTG RTVYDLPRRA
AHTAFDPEAA AERDPGIRIE VP