Gene Caci_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1792 
Symbol 
ID8333135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2032131 
End bp2033264 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content70% 
IMG OID644954942 
Producthypothetical protein 
Protein accessionYP_003112554 
Protein GI256390990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGA CGACACTCAC CCGGGACACG CTGAACCGCA CGCTCTTGGC GCGCCAGCAC 
CTGCTGACCC CGCGCAGCGG TTCCCTCGCC GAGACCGTCG AGGCGATCGG CGCGATCCAG
GCGCAGTACT GGCCGGCCGT CGCGATCTCG CTGTTCACCC GCCACGACGG TGCCACGCTC
GCAGCGGTCT ACGACGCCTT CGAGCGGCGC GAATTGGTCG TCGGCTCCTC GATCCGTGGC
ACGGTGCACG CCGTCAGCCG CGCCGAGCAC CCCTTGTACG CGGCCGTCTC CGAAGCCACC
AACGCCGACG TGCTCACCGC CCGGGACGAG GCCAAGGATC CGGGCATGCA TGCCTTGCGC
GCCGAGGTCC TGGAGTTCGC CGCCGACAAG CCGCGCGCCG CCGCCGAGTT CGCGGAGTTC
GCGGAGCAGT GGATCGAGAA GCACCCGGGC CGTATGTCGG CGGCGAACCT GGAGTACCAC
CAGTCGCGCA ACTGGCGCCC GATCTACCGC AGCAACGCCC TGATCCGCTT CCCGGCAGAC
GGCCGCTGGT CCCCGGCGAC CGGTCCGAAG ACGTTCCTGT ACTCGCCCGA ACGCGCCGCC
GACACCGGCG CCGCGATCGC CGCGCTGGTC CGCCGGCATC TCGGCGCGTT CGGTCCGGCG
GCGGCGGACG ACGTGGCGTT GTGGCTCGGG CTGAAGGTCT CCGTGGCGCG CGCTGTTCTC
GGCGGCTTCA GCGACCTGGT GACCTACGCG GACGAAGCCG GACGCACCCT GTACGACCTC
CCCGACGGCG AGATCACCGA CGCGGAGACG AAGGCGCCGC CGCGTTTGCT GCCGCGCTTC
GACAGCATCC TGCTCGCGCA CAATGCCAAG CACCGGCAGC GCATCATCTC CCGGGAGTAC
TGGGAGCGCG TCTACAACGG CAAGAACCTG CAGATCCTGC CGTCGTTCCT GGTCGGCGGA
TACGTCGCGG GGATCTGGTC GCTCGAGGCG AAGAAGAAGC TTGCGACGCT GACGCTGGAG
CCGTTCCACA AGCTGGGGAA GGCTGACGCC AAGGCGCTGG GCGCCGAGGC GGAGCGGGTG
CTGCGGTTGC AGGCGCCGGA CTCCGCCTCG TACGCGGTCG AGTTCGCGGA CTAG
 
Protein sequence
MAPTTLTRDT LNRTLLARQH LLTPRSGSLA ETVEAIGAIQ AQYWPAVAIS LFTRHDGATL 
AAVYDAFERR ELVVGSSIRG TVHAVSRAEH PLYAAVSEAT NADVLTARDE AKDPGMHALR
AEVLEFAADK PRAAAEFAEF AEQWIEKHPG RMSAANLEYH QSRNWRPIYR SNALIRFPAD
GRWSPATGPK TFLYSPERAA DTGAAIAALV RRHLGAFGPA AADDVALWLG LKVSVARAVL
GGFSDLVTYA DEAGRTLYDL PDGEITDAET KAPPRLLPRF DSILLAHNAK HRQRIISREY
WERVYNGKNL QILPSFLVGG YVAGIWSLEA KKKLATLTLE PFHKLGKADA KALGAEAERV
LRLQAPDSAS YAVEFAD