Gene Caci_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1670 
Symbol 
ID8333013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1896482 
End bp1897216 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID644954820 
Producthypothetical protein 
Protein accessionYP_003112432 
Protein GI256390868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.244551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.103375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTTG GCGTATACAT CGATGGGTTC AACCTGTACT ACGGCGCGAA GTTCATCATG 
GGCGGCTCAG GCGTCCCAGG ATGGCGATGG CTTGACCTCC GAGGGCTGTC GGACTCGCTA
GTGGCCCGTG AATCAGGATG GCCCGGAGCT TCCGTAACCC GAGTGGTCTA CTGCACCGCC
CGAATCCGCG GTGGTTCGAA CCCCACCGCT CAGCACGATC AAGACACCTA CCTTCGAGCG
CTACAGGCAA GCAAGTCTGT TGACGTCTCT GAGGAGGGCT ACTACGTAGA GCGTCTCGCC
ACCGCGCCTC TCGCGAAGAA GGGGCCAAAG GGCAAGCCCG TACTCGTGAC GGCGGACTGG
CCACTGATGG TGCAGGACGC CCAGGGTACC GCCGTGGCTG GCGCTCGCTT CATCGCGCAA
GTGGCACGCC GCGAAGAGAA GGGTTCCGAC GTCAACGTCG CGAGTCACCT GCTCATCGAC
GTGTACGAAG GCCGCATCGA CGCGGCTGTG GTGATCAGCA ACGATAGCGA CCTTGCGTAT
CCCGTGCGGA TGATGCGCCA GAAGGTGCCG CTTGGACTCG TCAACCCCAC CAAGAACTAC
AACGCGGGGG CTTTGAACGG CAACCCCTCA GACGGCGTCG GCGGTCACTG GTGGTACCAA
CTTACTGCGG CCGATCTGAC GTCTTCGCAG CTCACAAGCC TTGTCGGGAA GATCACCAAG
CCGGTTGGGT GGTAG
 
Protein sequence
MRVGVYIDGF NLYYGAKFIM GGSGVPGWRW LDLRGLSDSL VARESGWPGA SVTRVVYCTA 
RIRGGSNPTA QHDQDTYLRA LQASKSVDVS EEGYYVERLA TAPLAKKGPK GKPVLVTADW
PLMVQDAQGT AVAGARFIAQ VARREEKGSD VNVASHLLID VYEGRIDAAV VISNDSDLAY
PVRMMRQKVP LGLVNPTKNY NAGALNGNPS DGVGGHWWYQ LTAADLTSSQ LTSLVGKITK
PVGW