Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1588 |
Symbol | |
ID | 8332931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1796898 |
End bp | 1798001 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954738 |
Product | hypothetical protein |
Protein accession | YP_003112350 |
Protein GI | 256390786 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGGCC GCGGACGCAA GATGTGGACC CGGACCGCGC TGTGCGCGGC AGCGTTGGCG ACACCGCTGG CGGTGAGCGG ATGTCAGAGC ACGACGAACG CCGCGGGGGC GGGCGGGTCC GGCGGCGCGG CCGCGGCGCA GGCGGGGGCT TCGAGCGGCG CGAGCAGCTC GAGCAGCGCG GCGGCGCCGT CGTCGGCATC CACGTCGTCG GCGCCGTCCA CGTCGGCACC GTCGGCGCTG AACGCCACCG GCGGCACCGG TCTGACGGTC TCAGAGGGCG GTAGCAAGCT TCTGATGAAC GGCACCTCCG TCGACTTCGG CACGCAGGTG CACGACCCGG CCTGGTCCCC GGACGGCACC CGGCTGGCCT TCATCGACGG CGGCGGCAAC CTGGTGGTGG CGAACGCCGA CGGCTCCGGC CGGACCGAGG CGGCGCACAA CCCCGGCGGG CAGACCTGGT CGCACCCGAC GTGGCAGACC ACGCAGGCCG ACTCGGCGGA CAACCTGCCG CCGCGGAACA ACATCTTCTT CGCCTCGACC GCCGGCGGCG CCACGCTGTG GGAGGTCTCG ACCGACGCCC ACGACGCGCA ACCCAAGCAG CTCTCACTCG GCGGCTACCC CGGACAGGGA AACACTCCGC CGAGCAAGAC CGCCAACGAC TGGCCTTCCG GCGGCGGCCG CTACGGCGGC GCGGTGTACG AGCACGAGAA CGGTTCGTCC TCCGACGTCT ACATCCGCGA CGACTACCTG CGCCAGCAGG GCGGTCTGGC GATCAAGAAC GCGTCCGAGC CGGACTACGT CCTCGTCGGC AGCTCCGCGA CCCACGAGGG GACGCCGGAG GTCGTGTTCG TCCGCCAGGT CGGCGCGCAC AAGCACGTGT TCGTCGAGAG CATCCAGACC AGCACCGGCG GCAGCGCCGC CGCGGCGCGC GACCTGACCC CGCACGCCAC CACCGACTGC ACCGAGCCGG CGATCTCCCC GGACGGCAAG ACCGTCGCGT TCTCCACGTC CTCCGGCGTC GTGTCGGTCG CCGCGGACGG CACGGGGAAC CCGGCGTTCG TGACGCACGC GCCGGGATTC GTGGCCTTCC GGCCGGCTTC CTAG
|
Protein sequence | MAGRGRKMWT RTALCAAALA TPLAVSGCQS TTNAAGAGGS GGAAAAQAGA SSGASSSSSA AAPSSASTSS APSTSAPSAL NATGGTGLTV SEGGSKLLMN GTSVDFGTQV HDPAWSPDGT RLAFIDGGGN LVVANADGSG RTEAAHNPGG QTWSHPTWQT TQADSADNLP PRNNIFFAST AGGATLWEVS TDAHDAQPKQ LSLGGYPGQG NTPPSKTAND WPSGGGRYGG AVYEHENGSS SDVYIRDDYL RQQGGLAIKN ASEPDYVLVG SSATHEGTPE VVFVRQVGAH KHVFVESIQT STGGSAAAAR DLTPHATTDC TEPAISPDGK TVAFSTSSGV VSVAADGTGN PAFVTHAPGF VAFRPAS
|
| |