Gene Caci_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1588 
Symbol 
ID8332931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1796898 
End bp1798001 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content73% 
IMG OID644954738 
Producthypothetical protein 
Protein accessionYP_003112350 
Protein GI256390786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCC GCGGACGCAA GATGTGGACC CGGACCGCGC TGTGCGCGGC AGCGTTGGCG 
ACACCGCTGG CGGTGAGCGG ATGTCAGAGC ACGACGAACG CCGCGGGGGC GGGCGGGTCC
GGCGGCGCGG CCGCGGCGCA GGCGGGGGCT TCGAGCGGCG CGAGCAGCTC GAGCAGCGCG
GCGGCGCCGT CGTCGGCATC CACGTCGTCG GCGCCGTCCA CGTCGGCACC GTCGGCGCTG
AACGCCACCG GCGGCACCGG TCTGACGGTC TCAGAGGGCG GTAGCAAGCT TCTGATGAAC
GGCACCTCCG TCGACTTCGG CACGCAGGTG CACGACCCGG CCTGGTCCCC GGACGGCACC
CGGCTGGCCT TCATCGACGG CGGCGGCAAC CTGGTGGTGG CGAACGCCGA CGGCTCCGGC
CGGACCGAGG CGGCGCACAA CCCCGGCGGG CAGACCTGGT CGCACCCGAC GTGGCAGACC
ACGCAGGCCG ACTCGGCGGA CAACCTGCCG CCGCGGAACA ACATCTTCTT CGCCTCGACC
GCCGGCGGCG CCACGCTGTG GGAGGTCTCG ACCGACGCCC ACGACGCGCA ACCCAAGCAG
CTCTCACTCG GCGGCTACCC CGGACAGGGA AACACTCCGC CGAGCAAGAC CGCCAACGAC
TGGCCTTCCG GCGGCGGCCG CTACGGCGGC GCGGTGTACG AGCACGAGAA CGGTTCGTCC
TCCGACGTCT ACATCCGCGA CGACTACCTG CGCCAGCAGG GCGGTCTGGC GATCAAGAAC
GCGTCCGAGC CGGACTACGT CCTCGTCGGC AGCTCCGCGA CCCACGAGGG GACGCCGGAG
GTCGTGTTCG TCCGCCAGGT CGGCGCGCAC AAGCACGTGT TCGTCGAGAG CATCCAGACC
AGCACCGGCG GCAGCGCCGC CGCGGCGCGC GACCTGACCC CGCACGCCAC CACCGACTGC
ACCGAGCCGG CGATCTCCCC GGACGGCAAG ACCGTCGCGT TCTCCACGTC CTCCGGCGTC
GTGTCGGTCG CCGCGGACGG CACGGGGAAC CCGGCGTTCG TGACGCACGC GCCGGGATTC
GTGGCCTTCC GGCCGGCTTC CTAG
 
Protein sequence
MAGRGRKMWT RTALCAAALA TPLAVSGCQS TTNAAGAGGS GGAAAAQAGA SSGASSSSSA 
AAPSSASTSS APSTSAPSAL NATGGTGLTV SEGGSKLLMN GTSVDFGTQV HDPAWSPDGT
RLAFIDGGGN LVVANADGSG RTEAAHNPGG QTWSHPTWQT TQADSADNLP PRNNIFFAST
AGGATLWEVS TDAHDAQPKQ LSLGGYPGQG NTPPSKTAND WPSGGGRYGG AVYEHENGSS
SDVYIRDDYL RQQGGLAIKN ASEPDYVLVG SSATHEGTPE VVFVRQVGAH KHVFVESIQT
STGGSAAAAR DLTPHATTDC TEPAISPDGK TVAFSTSSGV VSVAADGTGN PAFVTHAPGF
VAFRPAS