| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1583 |
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| Symbol | |
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| ID | 8332926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1791024 |
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| End bp | 1792706 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644954733 |
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| Product | RNA binding metal dependent phosphohydrolase |
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| Protein accession | YP_003112345 |
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| Protein GI | 256390781 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGCC TATTGATCGC GATCGCAGCG GTGGTCGCGG CATGCGTCGG CCTGCTCGTG
GGCATGAACG TCGGCGGTTC CCGCCGCATC AACAATCTCA AGAAGAGCGC CTACGAGGAC
TTCGACAAGC AGGTCGCCGA GCTGGCGCAG CGGGCTCAGG CGCGCGAGGG CGAGCACGCC
TCCGCGGTCG TGGCCGCCCA GCGCGACCTG GCCGCCGTGC ACCGGGAGGC CGCCGAGGTG
CGCAAGCAGG CCGACGCCCA GGCCGTGCAG ATCCGGGAGC AGGCGGCCTC CGCCGCGACC
GTGGAGATGG ACCGCGCGCG CCGGATCCGG GACGAGGCCG AGGCCGAGAC GCGCGTGCTC
AAGGACGACA TCCGCGAGCT GCGGCTGGAC CTGGAGCGGC GGGAGGCCCG GCAGGCCGAG
CGCGAGGAGC GGCTGGACGC CGACCTGCGC CGGACCGCCG ACAAGGAGCG CGAGCTGGCC
GCGGCCGACG CCGAGCTGGA GCGCAAGCGG GCCGAGCTGG CGACGCTGGA GGACGAGCGG
CGCGCGATCC TGGAGCGCGC CGCCGCGCTG TCCGCCGGCG AGGCCAAGAC CGAGCTGGTG
AAGTCGATCG AGAACCAGGC CAAGCGCGAG GCCGCGGTGC TGATCCGGCA GATCGAGCAG
GAGGCGCGCG ACGAGGGCGA CAAGCGCGCC CGCAAGACCG TGGCCCTGGC CATCCAGCGG
GTGGCCAGCG AGCAGACCGC CGAGTCCGTG GTCAGCGTGC TGCACCTGCC CAGCGATGAC
ATGAAGGGCC GGATCATCGG GCGCGAGGGC CGGAACATCC GGGCCTACGA GTCGATCACC
GGGGTCAACC TGATCATCGA CGACTCGCCC GAGGCGGTCC TGCTGTCCTG CTTCGACCCG
GTGCGCCGCG AGGTCGGCCG GCTCACGCTG GAGGAGCTGG TCCTGGACGG CCGGATCCAC
CCGCACCGCA TCGAGGAGAT CTACGAGCGC TCCAAGGCCA AGGTCGAGAC GCTGTGCGTG
CGCGCCGGCG AGGACGCGCT GATGGAGCTC GGCATCACCG ACATGCACCC GGAGCTGATC
GCCCTGCTCG GCAAGCTCCG CTACCGCACC TCCTACGGCC AGAACGTGCT CAAGCACCTG
GTGGAGTCCG CGCACCTGGC CTCGATCATG GCCTCCGAGC TGCGGCTGGA CCCGGTGCTG
CTCAAGCGCT GCACGGTCCT GCACGACATC GGCAAGGCCC TGACCCACGA GGTCGAGGGC
AGCCACGCGC TGATCGGCGC CGAGATCGCC CGCAAGTACG GCGAGCACGA CGACGTCGTC
CACGCCATCG AGGCGCACCA CAACGAGGTC GAGGTCCGCA CCGTCGAGGC GGTGCTGACG
CAGGCCGCCG ACGCGATCAG CGGCGGCCGC CCCGGCGCGC GCCGGGAATC GCTGGAGGCC
TACGTCAAGC GTCTGGAGCG GCTGGAGCAG ATCGCGGCCG AGCAGGAAGG CGTGGAGAAG
GTCTTCGCCA TGCAGGCCGG CCGCGAGATC CGGGTGATGG TCGTCCCCGA CGCGGTCGAC
GACATCCAGG CGCAGGTCAT CGCGCGGGAC ATCGCCAAGC AGGTCGAGGA GGAGCTGACC
TACCCGGGAC AGATCCGGAT CACCGTGGTG CGGGAGTCGC GCGCGACCGA GTACGCACGC
TGA
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| Protein sequence | MVGLLIAIAA VVAACVGLLV GMNVGGSRRI NNLKKSAYED FDKQVAELAQ RAQAREGEHA
SAVVAAQRDL AAVHREAAEV RKQADAQAVQ IREQAASAAT VEMDRARRIR DEAEAETRVL
KDDIRELRLD LERREARQAE REERLDADLR RTADKERELA AADAELERKR AELATLEDER
RAILERAAAL SAGEAKTELV KSIENQAKRE AAVLIRQIEQ EARDEGDKRA RKTVALAIQR
VASEQTAESV VSVLHLPSDD MKGRIIGREG RNIRAYESIT GVNLIIDDSP EAVLLSCFDP
VRREVGRLTL EELVLDGRIH PHRIEEIYER SKAKVETLCV RAGEDALMEL GITDMHPELI
ALLGKLRYRT SYGQNVLKHL VESAHLASIM ASELRLDPVL LKRCTVLHDI GKALTHEVEG
SHALIGAEIA RKYGEHDDVV HAIEAHHNEV EVRTVEAVLT QAADAISGGR PGARRESLEA
YVKRLERLEQ IAAEQEGVEK VFAMQAGREI RVMVVPDAVD DIQAQVIARD IAKQVEEELT
YPGQIRITVV RESRATEYAR
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