Gene Caci_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1563 
Symbol 
ID8332906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp1767640 
End bp1768389 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID644954713 
Producthypothetical protein 
Protein accessionYP_003112325 
Protein GI256390761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.688217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.108371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCG GCTACACCTG TCAGGCGGCG TCGTCGCTGC GGGCCAATGA TGATTTCGTG 
CTCGCGACTG AGCGGTTCGT GATCGTGTTG GACGGGGCGA CGGCGGCGGT GGGTGTCGAG 
TCGGGGTGCG TGCATGGTGT GCCGTGGTTG GTTGCGCGGC TTGGGGTGAA TCTCGCGGGG 
CTGCTTGTGC GGGATTTTGG TGCGGGGTTG GTGGATGTGC TTCGCGGGGG GATCGTTGCG 
ACGATGCGGG ATCACGGTGA TGGCTGCGAT CTTCGGAATC CCGATAGTCC TTCGACGACG 
GTCGCGATCT TGCGCTGTGG TGCGGAGTTC GTGGACTACA TCGTTCTGGG GGATTCGGCT 
GTTGTGGTCG AGCGTGGCGA TGGCGAGTTG GTGGTGGCGC ATGATGATCG CACGGCTTAC 
CTCACCGACC GTTCCGTCGA GGGCGTCAGC CGTTTGCGTA ACACGGACGA GGGTTTTTGG 
GTCGCGTCCA ATCGGCCTGA GGCGGCGGAC AAAGCTATTG CCGGCAGCGT GCCGTTGGCC 
GACGTCACTC GTGCCGCGTT GATGACCGAC GGCGTCACGC GCTTGGTCGA GCGGTACGGG 
CGTTCGTGGC TTGACCTGCT GGAGCGCATG GACGAGCACG GTCCGCGCGC CGTGGTCGCC 
GATGTTCGTG CCGAGGAGCT CGCCTCGCCG CCGGGTGCCT ATCGCGGCAA GCTCCATGAC 
GATGCCACCG CGGTCTTCTG CCGCTTCTGA
 
Protein sequence
MEVGYTCQAA SSLRANDDFV LATERFVIVL DGATAAVGVE SGCVHGVPWL VARLGVNLAG 
LLVRDFGAGL VDVLRGGIVA TMRDHGDGCD LRNPDSPSTT VAILRCGAEF VDYIVLGDSA 
VVVERGDGEL VVAHDDRTAY LTDRSVEGVS RLRNTDEGFW VASNRPEAAD KAIAGSVPLA 
DVTRAALMTD GVTRLVERYG RSWLDLLERM DEHGPRAVVA DVRAEELASP PGAYRGKLHD 
DATAVFCRF