Gene Caci_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1532 
Symbol 
ID8332871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1736917 
End bp1737474 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content66% 
IMG OID644954678 
Productribosome recycling factor 
Protein accessionYP_003112294 
Protein GI256390730 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0437112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGATG AGACCCTCCT CGAAGCCGAG GAGAAGATGG ACAAGGCCGT CGAGGTCGCC 
AAGGAGGATC TGTCGGGGGT CCGCACCGGC CGCGCCAACC CGGCGATGTT CAGCAAGCTG
ACCGCCGACT ATTACGGCTC GCCCACGCCG CTGAGCCAGA TGGCCTCCTT CCAGGTCCAG
GACGCGCGCA TGGTGGTCAT CGCGCCGTAC GACAAGACGG CGCTGGGCGC GATCGAGCGC
TCGATCCGGG ACAGCGACCT GGGCGTGAAC CCCTCCTCGG ACGGTGTGGT GATCCGGGTG
GTGTTCCCGC AGCTGACCGA GGAGCGCCGC AAGGAGTACA TCAAGGTCGC CAAGACCAAG
GGCGAGGACG CCAAGATCTC GGTCCGCAAC ATCCGCCGGC ACTCCAAGGA GAGCCTGGAC
AAGCTGGCCA AGGACGGCGA CGCCGGCGAG GACGACGTGC GCCGCGCCGA GAAGCACCTG
GACGAGCTGA CGCAGAAGCA CACCGCGCAG ATCGACGAGA TGCTCAAGCA CAAGGAAGCG
GAGCTGCTGG AGGTCTGA
 
Protein sequence
MIDETLLEAE EKMDKAVEVA KEDLSGVRTG RANPAMFSKL TADYYGSPTP LSQMASFQVQ 
DARMVVIAPY DKTALGAIER SIRDSDLGVN PSSDGVVIRV VFPQLTEERR KEYIKVAKTK
GEDAKISVRN IRRHSKESLD KLAKDGDAGE DDVRRAEKHL DELTQKHTAQ IDEMLKHKEA
ELLEV