| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1515 |
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| Symbol | trmD |
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| ID | 8332854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1719760 |
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| End bp | 1720578 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954661 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_003112277 |
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| Protein GI | 256390713 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.892714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.114984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG ACATCGTCAC CATCTTCCCC GAGTACCTGG CGCCGCTGGA CGTCTCGCTG
ATCGGCAAGG CGGCGGCCGC CGGGATCCTC GACGTGCGCG TGCACGAGCT GCGCACCTGG
ACCCACGACC GGCACAACAC CGTGGACGAC TCGCCGTGCG GCGGCGGGCC GGGCATGGTG
ATGAAGCCCG AGCCGTGGTC GGAGGCGCTG ACCCAGATCG TGCCGCCGGG GACGGAGGAC
GGAGCGCGGC TGATCGTGCC GACGCCCTCC GGCCGCCCCT TCACGCAGCG GATCGCCGAG
GACCTCGCGA CCGCGTCCCA CCTGGTGTTC GCCCCGGCGC GCTATGAGGG CATCGACCGG
CGGTTCATCG AGGCCGCCGC GGAGCGCATG CCTGTGGAAG AGCTCTCCAT CGGCGACTAC
GTGTTGGCCG GCGGCGAGGT CGCGGTGCTG GTGATGGTCG AGGCGGTGGG CCGACTGCTG
CCCGGCGTGT TGGGCAATGC CGAATCCGCT AAGGACGACT CCTTCGGGCA CTCCTCTGAC
GGCGGTATGG CAGGACTCCT AGAGGGTCCC GTATATACGA AGCCCGCCAG TTGGGACGGC
CGTGAGGTTC CGCCTGTGCT GCTGTCCGGA AACCACGCAG TGATCGCACG CTGGCGCCGG
GATCAAGCGT TGCGGCGTAC GTCGGAAATG CGCCCGGACC TGATCGCGGC CCTGGACTCG
GCGGCGCTGG ACAAGAAGGA CCGCGCGCAG TTGGCGGCTT TGGGCTGGTC GCAGACACCG
GACGGATTTC GTTTCGACCC CGACGCTGTG TCAGACTAG
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| Protein sequence | MRIDIVTIFP EYLAPLDVSL IGKAAAAGIL DVRVHELRTW THDRHNTVDD SPCGGGPGMV
MKPEPWSEAL TQIVPPGTED GARLIVPTPS GRPFTQRIAE DLATASHLVF APARYEGIDR
RFIEAAAERM PVEELSIGDY VLAGGEVAVL VMVEAVGRLL PGVLGNAESA KDDSFGHSSD
GGMAGLLEGP VYTKPASWDG REVPPVLLSG NHAVIARWRR DQALRRTSEM RPDLIAALDS
AALDKKDRAQ LAALGWSQTP DGFRFDPDAV SD
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