| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1456 |
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| Symbol | |
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| ID | 8332795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1659878 |
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| End bp | 1660918 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644954604 |
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| Product | sugar ABC transporter substrate-binding protein |
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| Protein accession | YP_003112220 |
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| Protein GI | 256390656 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.623971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.725666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTGC ACCGTACTTC TAGATCAGTA ATGGCCCTCA CGGCCGTTGT GGCGCTCGGA
CTGAGCGCCG CCGCCTGTGG ACGAGGCGGC TCCAAGTCCG ACTCCGGCGG CAAGAAGATA
GGCATCGACT TCCCCAGGTC GGACTCCGAC TTCTGGAACA GCTACGCCAA GTACGTCAAC
GCCGACGTCA AGTCCGGCAG CATGAACGCG CTGCCGCCGA CGAACTCCAA CAACAAGACC
GACACCCTGG TCTCCAACGT CACGACGCTG ACGGGCCAGG GCGCCAAGGT CATCGTGATG
GCGCCGCAGG ACACCGGCGC GATCGCCAGC ACCCTGGACA GCCTGGCGAG CAAGAAGATC
CCGGTGGTCA GCGTGGACAC CCGCCCCGAC AAGGGGCAGG TCTACATGGT CGTCCGCGCC
GACAACAAGG CCTACGGCAC CAAGGCCTGC CAGTTCCTCG GCGACAAGCT CAAGGGCACC
GGCACCATCG TGGAGTTCGA GGGCGACCTG ACCTCCATCA ACGGCCGCGA CCGCTCCCAG
GCCTTCGGCG ACTGCATGAA GCAGAACTAC CCGAACATCA AGGTGGAGGC CGAACCGACC
AACTGGGTCG GCGACACCGC CGCCGCCAAA CTCCAGGACG CCCTGAACGC CGGCACCGTC
AACGGCATCT ACATGCAGGC CGGCGGCGTC TTCCTAGCCC CGACCCTCTC CCTGCTCAAG
CAGAAGAACC TCCTGGTCCC CCCGACCGAC CCCAAGCACA TCTTCATCAT CTCCAACGAC
GGCATCCCGG CAGAGTTCCA AGCCATCAAG GCCGGCCAGA TCGACGCCAC CGTCTCCCAA
CCCGCCGACC TCTACGCCAA GTACGCCCTC TTCTACGCCC AAGCCGCCGC CCAGGGCAAA
ACCTTCGCCC CCGGCCCGAC CGACCACAAC TCCACCATCA TCCAGCTCCC CAACGGACTC
GAGGACCAGC TCCCCGCCCC GCTGGTGACC TCGGCGAACG TCGACGACAG CTCCTTGTGG
GGCAATCAGG TGGGCAAGTG A
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| Protein sequence | MRLHRTSRSV MALTAVVALG LSAAACGRGG SKSDSGGKKI GIDFPRSDSD FWNSYAKYVN
ADVKSGSMNA LPPTNSNNKT DTLVSNVTTL TGQGAKVIVM APQDTGAIAS TLDSLASKKI
PVVSVDTRPD KGQVYMVVRA DNKAYGTKAC QFLGDKLKGT GTIVEFEGDL TSINGRDRSQ
AFGDCMKQNY PNIKVEAEPT NWVGDTAAAK LQDALNAGTV NGIYMQAGGV FLAPTLSLLK
QKNLLVPPTD PKHIFIISND GIPAEFQAIK AGQIDATVSQ PADLYAKYAL FYAQAAAQGK
TFAPGPTDHN STIIQLPNGL EDQLPAPLVT SANVDDSSLW GNQVGK
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