Gene Caci_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1324 
Symbol 
ID8332659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1503189 
End bp1503974 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content73% 
IMG OID644954470 
Productprotein of unknown function UPF0099 
Protein accessionYP_003112089 
Protein GI256390525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG GCGACCCCTT CGCCCCGCCG ACTTTGCCAA CGTCGCCGAC TTCGCCGCCT 
GTCCCCGCTG TCGCAGCGGC GACCGAGGAG GAAGCGGCGG CGCGCGACGC GAACCCGCAA
TACGTGCTGC CCTTGGTGGT CCGCATCGAG CGTGCGGCAC CACCGCAGCG TACTGACGCG
CTGGAGACGT CGGCACGCGC CGTCCTCACC TTCCTGTCCG ACCCGCGTTC CACCGAGCCC
GACGGCGAGT GGACGGCGCT GGTGGACGCC TGGACCGACG GCCGCATCCG CAAGGTCGTC
CGCCGAGCCC GAGGCGCCGA ATGGACGCGT GCCGAGGCGC TCCCGGGCAT CACCGTCACC
GGCACCGCCG AGACCGACCC GGCGCACGTC CGCGTCTACC CGCCGATCCC GCTCGACGCA
TGGCCGAAGG ACCTGGCACG CCTCCAGGTC TCCGGCACGG ACCTCGAGGA CGCCGAGCCG
CCCACCCCGG TCGCCCCAGG CTCGCAGCCG GTCCTGTGGC TGAATCCGGA GCTGGAGATG
ACCGCGGGCA AGGCCATGGC GCAGGTCGGG CATGCCGCGC AGATCGCATG GTGGCGCTTG
AACGACGCCC AGCGCAAGGA ATGGGCCGAC GCCGGCTTCC CGCTCGCGGT GCGGGTGGCT
GCGAAGGAAG CGTGGCCGGC GCTCACGAAC TCGGGACGTC CGCTGGTGCG CGACGCGGGC
TTCACGGAGA TCGCACCGGG ATCCTGCACC GTCGTCGCGG ATCTGCCCGT GCTCGGCGAC
GACTGA
 
Protein sequence
MEPGDPFAPP TLPTSPTSPP VPAVAAATEE EAAARDANPQ YVLPLVVRIE RAAPPQRTDA 
LETSARAVLT FLSDPRSTEP DGEWTALVDA WTDGRIRKVV RRARGAEWTR AEALPGITVT
GTAETDPAHV RVYPPIPLDA WPKDLARLQV SGTDLEDAEP PTPVAPGSQP VLWLNPELEM
TAGKAMAQVG HAAQIAWWRL NDAQRKEWAD AGFPLAVRVA AKEAWPALTN SGRPLVRDAG
FTEIAPGSCT VVADLPVLGD D