Gene Caci_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1315 
Symbol 
ID8332650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1493872 
End bp1494714 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content72% 
IMG OID644954461 
Productphenazine biosynthesis protein PhzF family 
Protein accessionYP_003112080 
Protein GI256390516 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATCC TTCGTTACAC CGCCTTCAGT TCTGATCCGG CCGGCGGCAA TCCGGCCGGT 
GTGGTCCTCG ACGCCCGCGG CACCGATGAC GCCGCGATGC TTGCCGCAGC TGCGGAAGTC
GGCTACTCCG AGACCGCGTT CTTGATGCCG ACCGAGCAGG ACCGCGTCAT GGACGTGCGC
TACTTCAGTC CGCTCGCGGA GGTCCCGTTC TGCGGACACG CGACCATCGC GACCGCCGTC
GCCTACGCTG AGCGCCACGG CGCCGGCGAC CTGATTCTGA ACACCCGCGC CGGCACCGTT
CCGGTCCACA CCACCGCCGG GACCGCGGGC AAGCTGACCG CCACCTTGGT CAGCGTCCCG
CCGAAGTCCC AGGACCTGCG CGGCCCGGTG CTGGCCGAGC TGCTCGCCAT CCTCGGCTGG
ACCGCCAGCG ACCTGCACGA CGCCCTGCCG CCCCGCGTCG CTTTCGGCGG CGCCTGGCAC
CCGATCCTCG CCACGCCGAG CCGCTCCCGG CTCACCGAAC TCGACTACGA CATGGACGCC
CTGCGCGCCC TGATGCTGCG CGAAGACTGG ACGACCATCG ACCTGCTCTG GCGCGAGTCG
CCCGACGTCT TCCAGGCCCG CAACCCCTTC CCGGTCGGCG GCGTCTTCGA GGACCCGGCG
ACCGGCGCGG CCGCCGCGGC GTTCGGCGGC TACCTGCGGG AGCTGGACCT GATCCCGGTG
CCCGCGACCG TGACCGTACA TCAGGGTGTG GACATGGGAC GGCCGAGCCT GCTGACCATC
GGCATCCCCG CCGGGGACGG CGGGATCTCG GTATCCGGTA CCGCGGTCGC TCTGGCGGGG
TGA
 
Protein sequence
MEILRYTAFS SDPAGGNPAG VVLDARGTDD AAMLAAAAEV GYSETAFLMP TEQDRVMDVR 
YFSPLAEVPF CGHATIATAV AYAERHGAGD LILNTRAGTV PVHTTAGTAG KLTATLVSVP
PKSQDLRGPV LAELLAILGW TASDLHDALP PRVAFGGAWH PILATPSRSR LTELDYDMDA
LRALMLREDW TTIDLLWRES PDVFQARNPF PVGGVFEDPA TGAAAAAFGG YLRELDLIPV
PATVTVHQGV DMGRPSLLTI GIPAGDGGIS VSGTAVALAG