Gene Caci_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1303 
Symbol 
ID8332638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1480033 
End bp1480500 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content71% 
IMG OID644954450 
Productprotein of unknown function UPF0066 
Protein accessionYP_003112069 
Protein GI256390505 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCT TCGAGGTCAC CCCGATCGGC ACGGTCCGCA ACGACCGGAC GGACGTTCAG 
AACTCGGACA ACTGGGGCGC CGTCCGCAGC ACCATCGTCG TCGACGAGCG CTTCGGCGAG
GCGTGCCTGC AAGGACTGGA GGGCTTCTCG CACGTGGAGG TCCTGTTCGT CTTCGACCAG
CTCGCCGAGC GCGAGGACTA CCGCGAGCCC GCGCCCTACC GCGGACGCGC CGACCTGCCG
CCGGTCGGGA TCTTCGCCGG CCGCGGTCCG CGCCGGCCGA ACCGCATCGG CGTGACGTCC
TGCGCCGTGG AGTCGGTCCG CGGGCGCGAG CTGACCGTGG TGGGTCTGGA CGCGGTCTCC
GGCACGCCGG TCCTGGATCT GAAGCCGGTG ATGGCCGAGT TCCAGGCCGT GGACGTCCGC
CAGCCGGCGT GGGTGAGCGC GATGATGGCG GACTACTTCC GCGACTGA
 
Protein sequence
MTSFEVTPIG TVRNDRTDVQ NSDNWGAVRS TIVVDERFGE ACLQGLEGFS HVEVLFVFDQ 
LAEREDYREP APYRGRADLP PVGIFAGRGP RRPNRIGVTS CAVESVRGRE LTVVGLDAVS
GTPVLDLKPV MAEFQAVDVR QPAWVSAMMA DYFRD