| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1237 |
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| Symbol | |
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| ID | 8332572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1404192 |
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| End bp | 1405979 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954384 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_003112003 |
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| Protein GI | 256390439 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.5251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0344944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCG AGTTCACCAC CATCGGCGTC GTCGGCCTGG GCACGATGGG AGCCGGCATC
GCCGAAGTCA TGGCCCGCAA CGGCATCAAG GTCATCGGCG TCGAGGTCGA CGACGCCGGC
CTGGCCCGCG GCCGCGGCCA CCTGCGGTCC TCCGTGGCGC GCGCGGTCAA GCGCGGCAAG
CTGACCGACG CCGAGGCCCA GGAGCTGCAG GACCGGGTCG CCTTCAGCAC CAGCCTGGAC
GACCTGGCCG CCGCGGAGCT GGTCGTCGAG GCCGTGCCGG AGGACCTGGA GCTCAAGCGC
TCGGTCTTCC AGCGCCTCGA CGCGATCTGT CCGCCCGAGA CGGTCCTGGC GACCAACACC
TCGGCGCTGT CGGTGACCGA GATCTCGGTG GCGACCGCGC GGCCCTCGCG CGTGGTCGGC
GTGCACTTCT TCAACCCGGC GACGGTCATG AAGCTGGCCG AGGTGGTGCG CACCGTGGTC
ACCGACCCCG AGGTGGTCGA GGACGTCGAG GCGCTGGTGC GCCGGCTCGG CAAGGACGAC
GTCACCTGCG GGGACCGCGC CGGCTTCATC GCCAACGCGC TGCTGTTCGG CTACCTGAAC
CACGCGGTGG CGATGTACGA GCAGAAGTAC GCCACCCGCG AGGACATCGA CACCGCGATG
AGGCTCGGCT GCGGCCTGCC GATGGGCCCG CTGGCGCTGC TGGACCTGAT CGGGATCGAC
ACCGCCTACG AGATCCTGGA CACGATGTAC AAGCAGGGGC GCGACCGGCT GCACGCCCCG
GCGCCGATCC TGAAGCAGAT GGCGACCGCC GGGCTGCTGG GCCGCAAGAC CGGTCGCGGA
TTCTATACAT ATGAGAGCTC TGACTCCCCG GTCGTGGTCG ACGACGAGCA GACCCCCGAC
GCCGGCCAGG GCCGGCACGG CTCGGCGGTC CGCGACGTGC GGCGGATCGG CGTCGTCGGC
TCGGGCACGA TGGCGAACGG CATCGCGGAG GTCTGCGTCA AGGCCGGCTA CCAGACGGTG
CTGGTCGCCC GGGCGACGGC CAAGGTGGAC GCCGCGCGCG CGGCGATCTC GCGCTCGCTG
GAGAAGGCCG TGCAGCGCGG CAAGCTCGCC GCCGGGGACC GGGACGCGGC GCTGGAGCGC
CTGATCGGCA CCATCGACCT GACCGACCTG TCCGACTGCG ACCTGGTCAT CGAGGCGGTC
GTGGAGGACG TCGAGGTCAA GCGCGCGCTG TTCTCGAACT TCGACGAGCT GGGCAAGCCC
GGCGCGATCC TGGCCACCAC GACCTCCTCG CTGCCGGTCA TCGAGTGCGC GATGGCCACG
CAGCGGCCGG CGGACGTGGT CGGGGTGCAC TTCTTCAACC CCGCGCCGGT GATGAAGCTG
GTCGAGGTCG TGCGCACGGT GAAGACCGCC GACGACGTGG TGGCCACCGT GCACGCCGTC
TGCGCGCGGC TGGGCAAGGT CGCCGTGGAC TGCGGCGACC GCGCCGGGTT CATCGTGAAC
GCGCTGCTGT TCCCGTACCT GAACGACGCG GTGAAGATGC TGGAGGCGCA CTACGCCACC
GCCGAGGACA TCGACACCGC GATGAAGCGC GGCTGCGGCT ACCCGATGGG CCCGTTCGAG
CTGCTGGACG TGGTGGGACT GGACGTCTCG CTGGCCATCC AGCGCGTGCT CTACCTGGAG
TTCCGCGAGC CCGGCTTCGC CCCGGCGCCG CTGCTGGAAC ACCTGGTGAC CGCGGGGTAC
CTGGGGCGCA AGGCCGGTCG CGGGTTCCGC GACTACAGCT CCCGCTGA
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| Protein sequence | MPREFTTIGV VGLGTMGAGI AEVMARNGIK VIGVEVDDAG LARGRGHLRS SVARAVKRGK
LTDAEAQELQ DRVAFSTSLD DLAAAELVVE AVPEDLELKR SVFQRLDAIC PPETVLATNT
SALSVTEISV ATARPSRVVG VHFFNPATVM KLAEVVRTVV TDPEVVEDVE ALVRRLGKDD
VTCGDRAGFI ANALLFGYLN HAVAMYEQKY ATREDIDTAM RLGCGLPMGP LALLDLIGID
TAYEILDTMY KQGRDRLHAP APILKQMATA GLLGRKTGRG FYTYESSDSP VVVDDEQTPD
AGQGRHGSAV RDVRRIGVVG SGTMANGIAE VCVKAGYQTV LVARATAKVD AARAAISRSL
EKAVQRGKLA AGDRDAALER LIGTIDLTDL SDCDLVIEAV VEDVEVKRAL FSNFDELGKP
GAILATTTSS LPVIECAMAT QRPADVVGVH FFNPAPVMKL VEVVRTVKTA DDVVATVHAV
CARLGKVAVD CGDRAGFIVN ALLFPYLNDA VKMLEAHYAT AEDIDTAMKR GCGYPMGPFE
LLDVVGLDVS LAIQRVLYLE FREPGFAPAP LLEHLVTAGY LGRKAGRGFR DYSSR
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