| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1178 |
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| Symbol | |
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| ID | 8332513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1326870 |
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| End bp | 1328600 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644954325 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003111944 |
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| Protein GI | 256390380 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.412652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGCA ATACGTCGTC ACTGCTCGCG GTCGCCATCT CCATAGGCCT GGCGGCCACC
GCGTGCTCCA GCACCAAGCA CACCTCGGAC TCCAGCACTG GGGGCGGCTC CAGCGCGTCG
TCGTCGGCCG GGGGCTCGTC GACGGGAACC CAGACGAGCT ACAAGCAGGG CGGGACGCTC
ACCATCTCGA ACGAGCAGGG CCAGACCTGG CCGTGTTCGT TCAACCCGTA CAACTCGACG
TTCAACCTGG AGAGCCTCGG CTTCATCTAC GAGCCGCTCA TCTACACCAA CATCCTGCAG
GACGCCAAGG AGACGCCGAT GCTGGCGTCG GACTACAAGT GGAACGCGGA CAAGACCCAG
ATCACCTTCA CCATCCGCGA CGGGGTGAAG TGGAGCGACG GCCAGCCGCT GACCGCCGAC
GACGTGGCCT ACACGTACAA CCTGATGAAG CAGACCCCGG CGCTGGACAA CTACTCGCTG
TGGTCCGCGG CCGGCCTGAC GAGCGTCGCG GCCACCGGCA ACCAGGTCAC GATGACCTTC
AAGCAGAACG CGCAGGTGTA CTTCTACACC TTCGCCACGC TGGTCGGCAT CGTCCCCAAG
CACATCTGGT CCACCGGCGA CGCCGCGGCG CACCCGGACA CCTGGACCGA CCCGAACCCG
ATCGGCTCGG GTCCGTACAC GGTCAAGTGC ACGCCGAACA ACATGGAGTA CAAGGCCAAC
GCCAGCTACT GGCAGCCCGG CAAGCCCTAC GTGACCACCC TGGAGTACCC GGCCTACCTG
GACAACGGCC CGGCGAACCA GGACCTGGCC AGCGGCAAGG CGCAGTGGGG CTCGCAGTTC
ATCACCGGCA TCAAGTCCTT CTACCTGAAC AAGTCGCAGG ACAACCACAC CTGGTCCCCG
CCGGTGCTCA ACGTCTCGAT CATCCCGAAC CTGGACCCCT CGCACGCGGC GACCAGCAAG
CTCGGCGTCC GCCAGGCGAT CGCCTACGCG ATCGACAAGG CCAAGGTCTC GGCGATCGGT
GAGGACGGCC AGCAGCTGAC GGGCAACCAG AGCGGCGTGG TCACCCCGAC CTTCGACAAG
TTCAACGACG CGGCGGCGAT CTCCGCGGCC GGGTACGACA AGCCGGACAT GGCCAAGGCC
GCGGCGGCGC TGCAGGGTGC CGGGTACAGC CCGAGCAACC CGCTGAACCT GACCATCATC
TCGATCCAGG GCTACACCGA CTGGGACGCC TCGATCGCGA TCATCAAGGA CGAGCTCAAG
CCGCTGGGCA TCAACCTCAC CGAGAGCTCG CTGACCAACC AGACGTACTA CGACAAGCTC
TACAAGGGCG ACTTCGACCT GGCCTACGGC TCCCAGCCCT CCGCCGGACC GTCTCCCTAC
ACCGAACTGC GCGCGTGGCT GCACTCGGCC AACACCGCGC CGCTGGGCCA GAGCGCGTCG
GCGGGCAACT TCGAGCGGTA CAAGAACCCC GCCGTGGACA GCCTGCTCGA CCAGTACGCC
ACGGCCGGCT CGGAGGACCA GCAGGTCTCG ATGATCAAGC AGGTGAGCCA GCACGTGCTG
CAGGACCTGC CGTTCATCCC GGTGACCGAG TCCGCGGACT GGTTCCAGTA CAACACCAAG
AACTTCGGCG GCTGGCCGAC GTCGGACAAC CCGTACGCGC AGCCCGCGGC CTACAACTAC
CCGGACAACG AGCAGGTGCT GCTGCACCTG TACTACAAGC CGGCCCAGTA A
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| Protein sequence | MRRNTSSLLA VAISIGLAAT ACSSTKHTSD SSTGGGSSAS SSAGGSSTGT QTSYKQGGTL
TISNEQGQTW PCSFNPYNST FNLESLGFIY EPLIYTNILQ DAKETPMLAS DYKWNADKTQ
ITFTIRDGVK WSDGQPLTAD DVAYTYNLMK QTPALDNYSL WSAAGLTSVA ATGNQVTMTF
KQNAQVYFYT FATLVGIVPK HIWSTGDAAA HPDTWTDPNP IGSGPYTVKC TPNNMEYKAN
ASYWQPGKPY VTTLEYPAYL DNGPANQDLA SGKAQWGSQF ITGIKSFYLN KSQDNHTWSP
PVLNVSIIPN LDPSHAATSK LGVRQAIAYA IDKAKVSAIG EDGQQLTGNQ SGVVTPTFDK
FNDAAAISAA GYDKPDMAKA AAALQGAGYS PSNPLNLTII SIQGYTDWDA SIAIIKDELK
PLGINLTESS LTNQTYYDKL YKGDFDLAYG SQPSAGPSPY TELRAWLHSA NTAPLGQSAS
AGNFERYKNP AVDSLLDQYA TAGSEDQQVS MIKQVSQHVL QDLPFIPVTE SADWFQYNTK
NFGGWPTSDN PYAQPAAYNY PDNEQVLLHL YYKPAQ
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