Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1167 |
Symbol | |
ID | 8332502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1314748 |
End bp | 1317591 |
Gene Length | 2844 bp |
Protein Length | 947 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644954315 |
Product | hypothetical protein |
Protein accession | YP_003111934 |
Protein GI | 256390370 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGC CGCGCTGGTT CGCCGAACTC GGCCCGGCCC GCCTGGTGCT GGCCGCGCTG GCGCTGTTGG CCGCCGGGAC CGCCGCGACG GCGGTGGCGG TCCCCGCCGA CACCAAGAAG TCGGACGCCT TCATCGTCAG TTCCCTGATC GGCAAGGCGC AATGGGCCCA CCGCGACCTG GTGGCCTCCG CGCTCCCGTT CTCCACCGAC GCCGCGTATC CGAAGTCCGC CTCCGACATC TCCTCGGTCG CCTCGGCGAA TCTGGCGGCG CTGCCGGACG CCCTGAACCA CCTGGTGTCG CAGACCTCGA TCACCCGGCA GTACGACCAC CTGCTGCCCG TCCGGAACCC GCCGGCGAAG CTGGCCGACC CGGCGTGGCT GCGCTTCGAC TGGGCGCCGC GGCTGGACGA CACGGTGCGG TACGTCTCCG GCGGCGCGCC CGGCAAGGAG ACGGTGAACG CGAAGGTCGA CCCGGACGAC GGGTTCGTCA AATCACTGAC GATGATGCTG CCGATCGCGG TGTCGCAGTC GACCGCGGAC CGCTTCGGGC TGACCGTCGG CACGGTCGTG GACATGAACA CGCCGGTATC TGCCAGCAGT CTGCAGTTCC AGATGTCCGT TCAGATCGCC GGGATCTTCG CGCCCAAGGC CGGTGTCGGC GGGGACGATC CGCTGTTTCG CATCGCCGAC AAGCCCGATC CGCAGCTCAC GACCGTCTGC CTCGGCGGCG CCAAGGGCTG CGACCAGTCG GTCGACGTCT GGGAATCGGA CGTGTTCGTC AGCCGTCCGG AGGCGATCGC GACGATCTCC AGCAGTACCC GGACCGGGGA GTACACGACG GTCTACGACT ACGTCGTCGA TCCGGCCCGC CTGACTCCCT CCGCGCTGAC GGCCGTGGGT CCGGCGCTGG ACCAGGCGTT GCTGGGAGTC AGCGATCTCA AGGGCAACGT CCAGTTGAAG ACCGGGCTCA AGGACTTGGC GAGCAGTATC CGCAGCACGC AGTCCGACAG CCATCAGCTG GCTGCCGTCG TGCTCGGTGC GTTGTCCGCG GGGGCGTTGG CGGCGCTGTT CCTCATGCTG CGGCTGACGG TGATGCGGCG GGCCGCGTAC GTCACGCTGT GCCGGGCTCG GGGCGCTTCG CCGGTGCGGT TGGCGTTGCG GCACGCGACG CAGGCGGCGG TGGTCGTGGG GGCGTTCGCG GTGCTGGGGG CGGTCGGGGC GGTGCGCGCC GGGCGTGGCA CGCTGCGCGA TCCGGCGGCG TGGTCCGGCG TGGTGCTGGT GACGGTGGTG ACGTTCGCGG TGGTCGGCTA CCTGGTGTTC CGGGCCGGGG ACCGCGTCGT TTCGCAGCGG CACGAGGCGG TCGGGGAGAC CGCGCGGACG CGGCGGATCG TGCGCGACGT CGGGCTGCTG GTGGCGGCCG GCGGCGCGTT GGCGGTCTAC CGCAGTCAGG GTTCTGCGAA TCCGGACGGT TCGATCGACT GGATCGCTGT CGCCGCCCCG GCTCTGCTCG CCTTCGCTGC CGGGATCGCC GCGGTGCGGT TGGTACCGGC GTTGTTCGGG CCGGCGGTGC GGGTGTTGGC GCGGCGTCGG GGGGCGGTCG GCTTCGTGGC CGCCGCGTTG TCCGGACGGC GGGTGCCGGT GGTCGCGGCG CCGTTGGCGG GGCTGGTCGT GGTGGTCGCC GCCGGGATGT TCGCGGCGGG GTACGACGCT TCGGTGACGC AGAAGGTGCG GGACGACAGC GTGCGCGCCG TCGGCGCCGC CGCGCGGATC GATGCCGAGC CGGACTACAA GGCGGTGTTC CCGGACGGGT TCGCCGCTGC GGCGGCGAAG GTTCGGGGCG TGCACAGCGT TTTCACCGCC CGGGCGGACG CCGGCGGGAT CGCGCAGATC ACCGCGGACG GCATCCCGCA GCCGCGGCCG ATCACGGTGA TCACCGTTGA TCCGGAAGCT TTCCGGCGGG CGGCTGCGGC GGCGTTGTCG GACGCCTCGG CGCGCGGGCA GGAGGTTCCG GCGAGCTGGC CGGTGCCGCC GAAGGCGGAC GGCACGGTGA CGGTGCTCGC CTCGCCGGGG CTGGCCGGGC TGTACTCCGG GTCGGTGTCG GTGTCCCAGA CGGCCGGGTC GTTGAAGGCG GTCATCGGGG GCTATGTGGA CGTGCCGTTG GCTGATTCGG TCGAGGACCG GGGCGGGTCG GACTACGTCG TGGTGCCGGC CGGCGAGGTG CCGATGGCCG ATCCCGGGAA GCCGAACGTC GCGTGGCTCA GCGGGGACAC CGGGGCGGTG TCGGTCTCGG CGTTGCGGGC GGTGCCGGGG GTGAGTGCGA GCTTTGTCGT CACGACGTTG GGGGACGTGC AGTCTCAGGC TTATCGCCAG GGGCGGGTGA CGGCGGCGCG GGACGTGTTC CACCTTGTTG AAGCGCTCTG CGTCGGATAC TTCGCGCTGT GTCTGTTGCA GTTGCTGACC GCGACGCGTG CGGTCAGCCG GGACAGCGCT CTGCTCCTCC AGGTGTTCGG GCTGGGGGTG GGGCGCAGCC GGGTGGTCGC GACGCTGGTG CCGTTGCCGG TCGCGGTGCT GGCGGCGGCT GCGGGGCTCG GGATGGGGGC GGGGTTGTCG CCGTTGCTGG GGTCGCTGAA CCACGGTCCG GGCGGCGGGG ACGACGGCTC GGTGGTGGCG GCCGGCTCGA TCGGGTGGGG GTGGACGGTG CCGGTCGTGG CGCTGGTGCT CGCGATGACG GTCGGCGGCG TGCTGCTCGA CCAACTGCTG CGGCGGCCGC CGGAGTTGTC GGTGCGGTTG CGGGACGCCG AATTCGAGGA GCGGGACCGG ATCGGAGTCG GCGGCGGCTG GTAG
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Protein sequence | MKTPRWFAEL GPARLVLAAL ALLAAGTAAT AVAVPADTKK SDAFIVSSLI GKAQWAHRDL VASALPFSTD AAYPKSASDI SSVASANLAA LPDALNHLVS QTSITRQYDH LLPVRNPPAK LADPAWLRFD WAPRLDDTVR YVSGGAPGKE TVNAKVDPDD GFVKSLTMML PIAVSQSTAD RFGLTVGTVV DMNTPVSASS LQFQMSVQIA GIFAPKAGVG GDDPLFRIAD KPDPQLTTVC LGGAKGCDQS VDVWESDVFV SRPEAIATIS SSTRTGEYTT VYDYVVDPAR LTPSALTAVG PALDQALLGV SDLKGNVQLK TGLKDLASSI RSTQSDSHQL AAVVLGALSA GALAALFLML RLTVMRRAAY VTLCRARGAS PVRLALRHAT QAAVVVGAFA VLGAVGAVRA GRGTLRDPAA WSGVVLVTVV TFAVVGYLVF RAGDRVVSQR HEAVGETART RRIVRDVGLL VAAGGALAVY RSQGSANPDG SIDWIAVAAP ALLAFAAGIA AVRLVPALFG PAVRVLARRR GAVGFVAAAL SGRRVPVVAA PLAGLVVVVA AGMFAAGYDA SVTQKVRDDS VRAVGAAARI DAEPDYKAVF PDGFAAAAAK VRGVHSVFTA RADAGGIAQI TADGIPQPRP ITVITVDPEA FRRAAAAALS DASARGQEVP ASWPVPPKAD GTVTVLASPG LAGLYSGSVS VSQTAGSLKA VIGGYVDVPL ADSVEDRGGS DYVVVPAGEV PMADPGKPNV AWLSGDTGAV SVSALRAVPG VSASFVVTTL GDVQSQAYRQ GRVTAARDVF HLVEALCVGY FALCLLQLLT ATRAVSRDSA LLLQVFGLGV GRSRVVATLV PLPVAVLAAA AGLGMGAGLS PLLGSLNHGP GGGDDGSVVA AGSIGWGWTV PVVALVLAMT VGGVLLDQLL RRPPELSVRL RDAEFEERDR IGVGGGW
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