Gene Caci_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1167 
Symbol 
ID8332502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1314748 
End bp1317591 
Gene Length2844 bp 
Protein Length947 aa 
Translation table11 
GC content72% 
IMG OID644954315 
Producthypothetical protein 
Protein accessionYP_003111934 
Protein GI256390370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC CGCGCTGGTT CGCCGAACTC GGCCCGGCCC GCCTGGTGCT GGCCGCGCTG 
GCGCTGTTGG CCGCCGGGAC CGCCGCGACG GCGGTGGCGG TCCCCGCCGA CACCAAGAAG
TCGGACGCCT TCATCGTCAG TTCCCTGATC GGCAAGGCGC AATGGGCCCA CCGCGACCTG
GTGGCCTCCG CGCTCCCGTT CTCCACCGAC GCCGCGTATC CGAAGTCCGC CTCCGACATC
TCCTCGGTCG CCTCGGCGAA TCTGGCGGCG CTGCCGGACG CCCTGAACCA CCTGGTGTCG
CAGACCTCGA TCACCCGGCA GTACGACCAC CTGCTGCCCG TCCGGAACCC GCCGGCGAAG
CTGGCCGACC CGGCGTGGCT GCGCTTCGAC TGGGCGCCGC GGCTGGACGA CACGGTGCGG
TACGTCTCCG GCGGCGCGCC CGGCAAGGAG ACGGTGAACG CGAAGGTCGA CCCGGACGAC
GGGTTCGTCA AATCACTGAC GATGATGCTG CCGATCGCGG TGTCGCAGTC GACCGCGGAC
CGCTTCGGGC TGACCGTCGG CACGGTCGTG GACATGAACA CGCCGGTATC TGCCAGCAGT
CTGCAGTTCC AGATGTCCGT TCAGATCGCC GGGATCTTCG CGCCCAAGGC CGGTGTCGGC
GGGGACGATC CGCTGTTTCG CATCGCCGAC AAGCCCGATC CGCAGCTCAC GACCGTCTGC
CTCGGCGGCG CCAAGGGCTG CGACCAGTCG GTCGACGTCT GGGAATCGGA CGTGTTCGTC
AGCCGTCCGG AGGCGATCGC GACGATCTCC AGCAGTACCC GGACCGGGGA GTACACGACG
GTCTACGACT ACGTCGTCGA TCCGGCCCGC CTGACTCCCT CCGCGCTGAC GGCCGTGGGT
CCGGCGCTGG ACCAGGCGTT GCTGGGAGTC AGCGATCTCA AGGGCAACGT CCAGTTGAAG
ACCGGGCTCA AGGACTTGGC GAGCAGTATC CGCAGCACGC AGTCCGACAG CCATCAGCTG
GCTGCCGTCG TGCTCGGTGC GTTGTCCGCG GGGGCGTTGG CGGCGCTGTT CCTCATGCTG
CGGCTGACGG TGATGCGGCG GGCCGCGTAC GTCACGCTGT GCCGGGCTCG GGGCGCTTCG
CCGGTGCGGT TGGCGTTGCG GCACGCGACG CAGGCGGCGG TGGTCGTGGG GGCGTTCGCG
GTGCTGGGGG CGGTCGGGGC GGTGCGCGCC GGGCGTGGCA CGCTGCGCGA TCCGGCGGCG
TGGTCCGGCG TGGTGCTGGT GACGGTGGTG ACGTTCGCGG TGGTCGGCTA CCTGGTGTTC
CGGGCCGGGG ACCGCGTCGT TTCGCAGCGG CACGAGGCGG TCGGGGAGAC CGCGCGGACG
CGGCGGATCG TGCGCGACGT CGGGCTGCTG GTGGCGGCCG GCGGCGCGTT GGCGGTCTAC
CGCAGTCAGG GTTCTGCGAA TCCGGACGGT TCGATCGACT GGATCGCTGT CGCCGCCCCG
GCTCTGCTCG CCTTCGCTGC CGGGATCGCC GCGGTGCGGT TGGTACCGGC GTTGTTCGGG
CCGGCGGTGC GGGTGTTGGC GCGGCGTCGG GGGGCGGTCG GCTTCGTGGC CGCCGCGTTG
TCCGGACGGC GGGTGCCGGT GGTCGCGGCG CCGTTGGCGG GGCTGGTCGT GGTGGTCGCC
GCCGGGATGT TCGCGGCGGG GTACGACGCT TCGGTGACGC AGAAGGTGCG GGACGACAGC
GTGCGCGCCG TCGGCGCCGC CGCGCGGATC GATGCCGAGC CGGACTACAA GGCGGTGTTC
CCGGACGGGT TCGCCGCTGC GGCGGCGAAG GTTCGGGGCG TGCACAGCGT TTTCACCGCC
CGGGCGGACG CCGGCGGGAT CGCGCAGATC ACCGCGGACG GCATCCCGCA GCCGCGGCCG
ATCACGGTGA TCACCGTTGA TCCGGAAGCT TTCCGGCGGG CGGCTGCGGC GGCGTTGTCG
GACGCCTCGG CGCGCGGGCA GGAGGTTCCG GCGAGCTGGC CGGTGCCGCC GAAGGCGGAC
GGCACGGTGA CGGTGCTCGC CTCGCCGGGG CTGGCCGGGC TGTACTCCGG GTCGGTGTCG
GTGTCCCAGA CGGCCGGGTC GTTGAAGGCG GTCATCGGGG GCTATGTGGA CGTGCCGTTG
GCTGATTCGG TCGAGGACCG GGGCGGGTCG GACTACGTCG TGGTGCCGGC CGGCGAGGTG
CCGATGGCCG ATCCCGGGAA GCCGAACGTC GCGTGGCTCA GCGGGGACAC CGGGGCGGTG
TCGGTCTCGG CGTTGCGGGC GGTGCCGGGG GTGAGTGCGA GCTTTGTCGT CACGACGTTG
GGGGACGTGC AGTCTCAGGC TTATCGCCAG GGGCGGGTGA CGGCGGCGCG GGACGTGTTC
CACCTTGTTG AAGCGCTCTG CGTCGGATAC TTCGCGCTGT GTCTGTTGCA GTTGCTGACC
GCGACGCGTG CGGTCAGCCG GGACAGCGCT CTGCTCCTCC AGGTGTTCGG GCTGGGGGTG
GGGCGCAGCC GGGTGGTCGC GACGCTGGTG CCGTTGCCGG TCGCGGTGCT GGCGGCGGCT
GCGGGGCTCG GGATGGGGGC GGGGTTGTCG CCGTTGCTGG GGTCGCTGAA CCACGGTCCG
GGCGGCGGGG ACGACGGCTC GGTGGTGGCG GCCGGCTCGA TCGGGTGGGG GTGGACGGTG
CCGGTCGTGG CGCTGGTGCT CGCGATGACG GTCGGCGGCG TGCTGCTCGA CCAACTGCTG
CGGCGGCCGC CGGAGTTGTC GGTGCGGTTG CGGGACGCCG AATTCGAGGA GCGGGACCGG
ATCGGAGTCG GCGGCGGCTG GTAG
 
Protein sequence
MKTPRWFAEL GPARLVLAAL ALLAAGTAAT AVAVPADTKK SDAFIVSSLI GKAQWAHRDL 
VASALPFSTD AAYPKSASDI SSVASANLAA LPDALNHLVS QTSITRQYDH LLPVRNPPAK
LADPAWLRFD WAPRLDDTVR YVSGGAPGKE TVNAKVDPDD GFVKSLTMML PIAVSQSTAD
RFGLTVGTVV DMNTPVSASS LQFQMSVQIA GIFAPKAGVG GDDPLFRIAD KPDPQLTTVC
LGGAKGCDQS VDVWESDVFV SRPEAIATIS SSTRTGEYTT VYDYVVDPAR LTPSALTAVG
PALDQALLGV SDLKGNVQLK TGLKDLASSI RSTQSDSHQL AAVVLGALSA GALAALFLML
RLTVMRRAAY VTLCRARGAS PVRLALRHAT QAAVVVGAFA VLGAVGAVRA GRGTLRDPAA
WSGVVLVTVV TFAVVGYLVF RAGDRVVSQR HEAVGETART RRIVRDVGLL VAAGGALAVY
RSQGSANPDG SIDWIAVAAP ALLAFAAGIA AVRLVPALFG PAVRVLARRR GAVGFVAAAL
SGRRVPVVAA PLAGLVVVVA AGMFAAGYDA SVTQKVRDDS VRAVGAAARI DAEPDYKAVF
PDGFAAAAAK VRGVHSVFTA RADAGGIAQI TADGIPQPRP ITVITVDPEA FRRAAAAALS
DASARGQEVP ASWPVPPKAD GTVTVLASPG LAGLYSGSVS VSQTAGSLKA VIGGYVDVPL
ADSVEDRGGS DYVVVPAGEV PMADPGKPNV AWLSGDTGAV SVSALRAVPG VSASFVVTTL
GDVQSQAYRQ GRVTAARDVF HLVEALCVGY FALCLLQLLT ATRAVSRDSA LLLQVFGLGV
GRSRVVATLV PLPVAVLAAA AGLGMGAGLS PLLGSLNHGP GGGDDGSVVA AGSIGWGWTV
PVVALVLAMT VGGVLLDQLL RRPPELSVRL RDAEFEERDR IGVGGGW